Sequence Feature: RNAi_reagent

General Information
Symbol	BKN60275	Species	D. melanogaster
Feature type	RNAi_reagent	FlyBase ID	FBsf0000415363
Collection	HD2	Associated gene(s)	PTP-ER
Genomic Location
Chromosome (arm)	2R	Sequence location	2R:17,507,855..17,508,300 [-]
Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Sequence Data
Length	446
Comments
Sequence	TTTGGTGAGCATTCCTGTCAGCGAGTAGGCCAACGACTGCCGCAACTGGC GCACTGCATTCAGGATGGCCGTGAAGCAACCGGTGCGCCCAATTCCAGCC GAGCAGTGGATGACGGGAAGGGGCTGGACTGCATTGAAGATGTCCTGCTG GTAGATCTCCAGCCGCTGAGCAGCCAGGTGGGCATTCCTCTCGCTCCTGG TGTCATCGTAGATGTCAAACTCCGACTCACACTTTCCAAGGTTGAGTACA TGCAAGCAGGTGTCCAGCAGCGTGTTGATGTCCCGAGGCGAGTGATGATC CGGCCAGTCGGGATACCAATAGTGGTAGCAGTAGATTTTCTGCAGGTGGT AGCTAGCACTCTGTGGCACACGAATGCAATAGAGCAGCACCAGCTTTCTC ACCGAGTAACCATTTCTTCGCACAATGCCGACGTTTTTAATGAGGA
Associated Information
Gene(s) (targeted or local)	PTP-ER
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
Experimental Data
Progenitors
PCR template	genomic (Horn et al., 2011.11.16)
Primer 1	TTTGGTGAGCATTCCTGTCA (Horn et al., 2011.11.16)
Primer 2	TCCTCATTAAAAACGTCGGC (Horn et al., 2011.11.16)
Comments
Collection Information
Collection: HD2HD2
Symbol	HD2HD2
Source and Progenitors
Species of derivation	D. melanogaster
Strain of derivation

Vector or progenitor construct
Description
	Collection of double-strand RNA fragments, used for genome-wide RNAi-knockdown assays in cell culture. RNAi targeting of transcripts annotated by the Berkeley Drosophila Genome Project and additionally predicted gene models.
Additional data

Cell lines
Observed in
Not observed in
Comments

Stocks Listed in FlyBase ( 0 )

External Crossreferences & Linkouts

Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	BKN60275 (Horn et al., 2011.11.16)
Secondary FlyBase IDs

References ( 1 )
Personal communication to FlyBase	Horn et al., 2011.11.16, GenomeRNAi reagent in FlyBase GenomeRNAi reagent in FlyBase [FBrf0216883]