A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol dsRNA-7486R Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000433931
Collection NIG_RNAi_Fly-1   Associated gene(s) Dredd
Genomic Location
Chromosome (arm) X Sequence location X:528,792..529,291 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0070119 FBtr0114559 FBtr0340083 FBtr0114560 FBtr0114561 FBtr0340081 FBtr0070120 FBtr0340082 FBsf0000033707 FBsf0000028870 FBsf0000017882 FBsf0000028869 FBsf0000092837 FBsf0000080677 FBsf0000382997 FBsf0000408552 FBsf0000397018
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2013_03
FB2013_02
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Length 503
Comments
One copy of repeat shown.
(Japanese National Institute of Genetics, 2012.5.21)
Sequence 
ACCACTCGGATGCCACCTACATTCTGCAGAAACTTTTGGCCATGACACGA
TCAGACTTCCCGCAAAGTGATCTACTCATAAAGTTCGCCAAGTCCCGGCC
AGAAACCTGGAGAAGACATCTCGTGGAGGCCCTGTGCATTATTGGGGCCC
GCAAGGTGCNTCCGGAGACTGGGTTTCTGCTGGCAGGAGCTGCGAATGCA
CTACTTGCCGCATATCGCTGGGATCACGCTGCATGTCCATCCTCTGTTGA
AGAGCCTCTACAGGATGTGTGAGGAGTTGTCGTTGGTGCAGAGTGGCCGC
NTTGCTCCTAGATGTTCGCGAAAAGGTGGAGAGCCAGCAGGCAGGAGATC
CACTTCGCTTCTACGATCCCGCGTACCTGGAGATCTTTTTGCTGGACTGG
CTGACCAGAAGGAGCATAAAGTTAGGGGACATAANATgcCGCAGGCAGCG
ATGTTCAGCTGCTGGTCGGCCATTTGAAGTCCAACGGTCTGCAGGCGCAA
GCA
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
cDNA
(Japanese National Institute of Genetics, 2012.5.21)
Primer 1
aaggcctacatggccggaccgACCACTCGGATGCCACCTACA
(Japanese National Institute of Genetics, 2012.5.21)
Primer 2
aatctagaggtaccTGCTTGCGCCTGCAGACCGTT
(Japanese National Institute of Genetics, 2012.5.21)
Comments
hide Collection Information
hide Collection: NIG_RNAi_Fly-1
Symbol NIG_RNAi_Fly-1
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Comprehensive collection of stocks carrying UAS-RNAi transgenes, each designed to target a single protein-coding gene.
(Japanese National Institute of Genetics, 2012.5.21)
Additional data
A collection of over 6,400 RNAi transgenes (over 12,300 lines), each designed to target a single protein-coding gene. Each construct contains a pair of identical 500-bp amplicons produced using cDNA templates. These have been cloned as inverted repeats that are expressed using the binary GAL4/UAS system, producing transcripts capable of assuming a double-stranded RNA structure.
(Japanese National Institute of Genetics, 2012.5.21)
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
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hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
7486R
(Japanese National Institute of Genetics, 2012.5.21)
dsRNA-7486R
 
Secondary FlyBase IDs
    hide References ( 1 )
    Stock list
    Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY.
    RNAi stocks available from NIG-FLY. [FBrf0218457]