A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol Brd_A Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000435168
Collection REDfly CRMs   Associated gene(s) Brd
Genomic Location
Chromosome (arm) 3L Sequence location 3L:14,964,895..14,965,426 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000159970 FBsf0000436413 FBsf0000436211 FBsf0000435168 FBsf0000435561 FBsf0000161311 FBsf0000161312 FBsf0000161313 FBsf0000161314 FBsf0000269446 FBsf0000291442 FBsf0000269447 FBsf0000224515 FBsf0000267011 FBsf0000273944 FBsf0000267012 FBsf0000245046 FBsf0000275629 FBsf0000252705 FBsf0000295328 FBsf0000333898 FBsf0000295329 FBsf0000203851 FBsf0000327119 FBsf0000327120 FBsf0000327121 FBsf0000340012 FBsf0000365351 FBsf0000307572 FBsf0000283170 FBsf0000293999 FBsf0000307573 FBsf0000283171 FBsf0000239381 FBsf0000272629 FBsf0000289488 FBsf0000294000 FBsf0000283172 FBsf0000307574 FBsf0000421870
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Description
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FB2013_03
FB2013_02
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hide Sequence Data
Length 532
Comments
Sequence 
GGACAGTGAAACCTGTCACAGAAAACCATATTTCCAAGTGGTGGTTCCAT
GCAACAAGAAATCCAAAAATATCTTAAATCCCTATAGCAGATTTAAGGGA
AAGATAAAGAAACCTTTCATGCAATAAACGAAGAAATTCGAGTTTCATTA
CGCTCCAAATTCAAATTTTGCCAAGGACCAAAACAACCCCGAAGAACAAG
TGTGAGGACAGTGAAGCCTGCCAGAGCAACTACGCTGCAGTGAGTGTGGA
ATCTTGAAAATCCCTGCACACCTTCGAGCGAATGTTCACTGTACTCGAAA
GGACCACAGTCTACCTGTACTGATCAAAAATGAAATGTTGACGTGTAAAT
ATTTCTCGTTTGCCGACAACATGTGTTTAACGAGGGTCTGTCACTTTTAT
CCTCCACTGTCAGCCTATTAACAATTAATAGCCAAAAACTAATCAAGGCA
TAAATTCGAGCCGAGTCCTCCGCAAACAAACCACTCAAATTACTAACCCG
AACCCGATGGAAAAGGGATGATCGTTTATTTT
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
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REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Brd_A
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Powell et al., 2004, Mol. Cell. Biol. 24(21): 9517--9526
    The proneural proteins Atonal and Scute regulate neural target genes through different E-box binding sites. [FBrf0180539]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]