A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol bap_FHVME Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000435331
Collection REDfly CRMs   Associated gene(s) bap
Genomic Location
Chromosome (arm) 3R Sequence location 3R:17,218,144..17,220,402 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000435750 FBsf0000435386 FBsf0000435260 FBsf0000435331 FBsf0000232782 FBsf0000260935 FBsf0000232783 FBsf0000197774 FBsf0000252007 FBsf0000276719 FBsf0000248925 FBsf0000197775 FBsf0000197776 FBsf0000265642 FBsf0000329983 FBsf0000329984 FBsf0000329985 FBsf0000329986 FBsf0000373756 FBsf0000373757 FBsf0000273126 FBsf0000254640
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Sequence Data
Length 2259
Comments
Sequence 
CAATAACACGCATAATTCACGGACTCTTTGACTTGGAGTTTCGGTTTTAC
AGCACGCTTCGGATTTCGAAGGGTTGAAGACGCACGCTGCATGTGGTCTT
GGAGTGAATGCAAATCGTCCTGCTCGTCCGGCGGCTCGGCTACTAATTTG
TTTATATTGCGCCGCCTCCGGATTTGTTTATGCAACCTTTTTTATGACAC
ACATGCCGGGGTGCTACGAGATGTCAGCTACTTGACGGCAATCCTTTTAA
ACCCGGCCGCCTGATATTTGGCTTGTAATTAATATGGAAATTAGTCATGG
GTCGCTTTCGGGGTCGGGGCCCAAGTGGCGTATGCGCAATCTTTGAACTG
CAATTAGTCGTCGCCTGTCACCGGGAATGTCGAGGACGTCGGGTAAACAA
TATTGGCAATATTTGCTATTTGTTTAAACATATTGGGCGGAGGCCTGCAT
TCTTAAGCAGAGAGTGCATTTAATGGCGGAACGCGAAATTCAAAAGAAAA
CGCCAAAAACACGCTGGCCGGACAGCTTAAAGTGTAAACAAAATGCCCGA
TCCGTTCACTTATTATAAAATGCACTGCATTCTTGTTTTGGCCCATCTCG
ATGCACTTTGCATCAGCGCTTCGGCGTTCGCTTTCCATGCTCCTGTTCAC
CATGCCCCTCCATAACGTGTCCCAATCCCAATCGCAATACCAATACCAAT
CCCAATCCGAATACGACCCCCATCCACAGACGTGTCCCTCGATCTCCATC
TCTGGCCGGTCGATCGTCTGCTGCACACATGTGTGCCATAAAAGGAGGAG
GCTGAGGAGATGGGATTTTCGACTGCGACTGCGACTGCCACTGCGACTGA
CACTTCGATTTGCCACTGCTATTGTTGTTGTTGTTGCACGTGTTGCTCTG
CCGATGCGTTTGTTTATGCCACATCCCTGCTACTAACAGTTCTTGGTAGG
AATAACTTCACAACAAATTCATCAACTAAACTCTAAACTCCACAGCGCGA
TACTCTACGCGCTGGCTAAGTCCATGGAAATTCTGTGATTTTCTGTTCTG
AGCTATGAATATAGATGTATGTGGTGTAAGATACTTAGCTTCAATAATAT
TTGAAAGTCAGAAAGCAGGCAGATTAAACAATCAATTACAAAACTGTATG
TAGATTATAATCCTTCTGATTAAATATATGTATGTATATGGTTCATTTGC
AGAGCATTTCGATGCCGCATATTTGAGCACGTCCAGACTGATTTTGTTAT
TGGCATAGTGCTCTTTGTTTTATGGGAGGATGGTCCTGGTCCTAAGAGGG
GGATGGGGATACCAGTTCCCAAAATGGGTTTGGAGCCGGAGCCAGCGACA
TCGCCTAATTGCTTTGCTGCCGGGTGGGCGATGGGGTTTGCCACTGATAT
GGATTCGGCGGAGCTAGGTAAATGAATCGTTGTCTTCCCGAGCGATTAAC
CCACTCACACCCACGGAAGACGATTGCTGAGTAAACAATGCTCGGAAGCA
GCGTACAAATGATGCCCCGGACTATTTGTGTTTATTTTGTTTTGAAAATT
GTGCGTTTAATTTATAGTTAATTGTTTTTCAGCCTTTCATTAGCCAACCA
AACCGAGCGGTGACTGTGTGCGGTCCCGAGAAATTCCCAGTAATTCCAGC
CCACAGGCCCGAGCATTCGGATGATATTATACTCGCACACCAATTGTTGA
TGATGGTGCTATTTGCGCAAGTTGTTGGGCAGCCCGCCCGTCCGTCCGAC
AAAATGGCCACCCACCTCAATTTCAATTTGAAATTCAATTTCCAACTCAA
TCTTCCGTCCGGCAGCTGTTGAAGCAATCTTTGCGCAATGCCAAATCCAA
ATCTAAATCTAAATCCACATCCCAATCCAAATCCAAATCGGATTCGATCC
AACCACCCCGCTTTCGGTGGCCACTCCTTTGCTTATTTGGCTTCAAATAA
AAAATCATTTAAATGATTTCGAGAACGGCTGCCTTAGCCTAGAGAAGAGC
ATGGTGGCATGAAATTGAATGATAAATGTTTTGGCTTTTGTGATTTTGTT
TATTGTTCAATTTCGGCTAAAAAATTCAAATTTTCACCGCATGCATAAAA
CGGTTTTGGTGCTCGGTCGCCTTTTTTTTTGTTGTCTTGCCTTTTTAACT
TATCGCGTTTTATAGACAGCCATTCAAATCGGCAAATATTGAGTTGAGTC
CAACTAGCACTAGTTGAATGGCTTGTTGTTTCGCGAGCTGTTTAGATGAA
AATGTTGTG
hide Associated Information
Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
hide Experimental Data
hide Progenitors
PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
bap_FHVME
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Jakobsen et al., 2007, Genes Dev. 21(19): 2448--2460
    Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network. [FBrf0201841]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]