A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol bap_bap3.2.1 Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000435386
Collection REDfly CRMs   Associated gene(s) bap
Genomic Location
Chromosome (arm) 3R Sequence location 3R:17,216,987..17,217,167 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000435750 FBsf0000435386 FBsf0000435260 FBsf0000435331 FBsf0000248924 FBsf0000197774 FBsf0000252007 FBsf0000276719 FBsf0000248925 FBsf0000197775 FBsf0000265642 FBsf0000329983 FBsf0000329984 FBsf0000373756 FBsf0000273126
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Length 181
Comments
Sequence
GGGATCGGAATTAGGATCGGAATTGGGAACATAGACATGTCCTTAGCGGC
ACAGTTGGTGGCTGACGACACAAGGACCTGCCTCAAGTGCCCGGCGGCGA
CAATTCTAACGGCCGGCCGACCTGTTGATGTTTATAAACAAACAAACAAA
TAGAATCACCAACTGACGCCCAGGATCGGAA
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
Primer 1
Primer 2
Comments
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hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
Additional data
Cell lines
Observed in
Not observed in
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REDfly
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
bap_bap3.2.1
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Lee and Frasch, 2005, Development 132(6): 1429--1442
    Nuclear integration of positive Dpp signals, antagonistic Wg inputs and mesodermal competence factors during Drosophila visceral mesoderm induction. [FBrf0183922]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]