A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol CG7229_CRM15 Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000435426
Collection REDfly CRMs   Associated gene(s) CG7229
Genomic Location
Chromosome (arm) 2R Sequence location 2R:15,150,809..15,151,808 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000435426 FBsf0000267905 FBsf0000253428 FBsf0000228865 FBsf0000267906 FBsf0000259869 FBsf0000266863 FBsf0000228866 FBsf0000247005 FBsf0000274528 FBsf0000274529 FBsf0000251628 FBsf0000324742 FBsf0000199809 FBsf0000324743 FBsf0000199810 FBsf0000324744 FBsf0000199811 FBsf0000324745 FBsf0000199812 FBsf0000358344 FBsf0000358345 FBsf0000303182 FBsf0000293582 FBsf0000280893 FBsf0000303183 FBsf0000293583 FBsf0000280894 FBsf0000303184 FBsf0000280895 FBsf0000303185 FBsf0000272238 FBsf0000240804 FBsf0000293584
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 1000
Comments
Sequence 
AAATTTAATCCTACTTTAAGGTATTTAATTTTATTTGTCCTTTATTTTAG
GGTAATTTTTAATGCCAGCTTTTTAGAAAGTTTTTTTATAGGATAAATAC
TTATTAAAGTCTTAAAGCTCTTTAAAAGTATATTGGAATATTTATATTGA
AAGTTTATAATTCCATTTTTTCTCATTCCATAATTTGTATTGCAGAATTT
TCGCACATGATTCGCTGGCCAAAAACCTCCTCCGTTGACTAAACCACCAC
CACCCCGCTCACAACCCCTAAAATGCAGGATAACTTGCAAAATCGCCACT
GCGATTCGCCAAAAACCCAATCGAAGAGTCATTTTCATGTTTGCGAAAAT
TGCAGGGGCAGCCAATGCCAATGATTTCCACTCCCATTTGCCAGGAGCAA
CCACCGGAGGTGCAGGGAACATTTTCCGCTTTCCCCCCTCCGGAAGCAGG
ATATGAACTTTGATGTTGCCACTGGACTACCAAAGGCGGATCATAAAAAA
ATCCGCAAAACGAGGGTTGTCTCTCGTAAAGTACTTATCGAAAACACCCC
AAAACACCCTCCCTCCGCGGCGCACCAACACAAGCGCACACACGCACTCA
CACACACGCACGCACACACACTTAGTGTGCATTATTAAAAGTGGATTGTG
CGTGTGCGTGCGAGTGTCTTGTATCTGGCAATTTTGCAGCAACAACAAAA
CGCGACAAAGGGCCGCATGCAAATTTTTTGTAGCAATCACCCAGGGGTTG
AAAATAAAATGAGCGTACACAAACGAACGAAGTTAGAAAAAAAATAACCG
GAAAATAAAGCCAAAGCTGCAGGCAGACGTCGTCCAGACGGGAAAACCTT
ACTAGATTATATAAATATACATATACATATATAAGTTCATATCACCAACC
ACCCAGATGGCCCTTCTGCGATTCCGGCCCTATGTTGTTTATGCTAAAAA
GCGTTAAAAATGCGACAGGAGCTTCCACATTTCCTGCAATATTTTCCTGC
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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hide Progenitors
PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
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REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
CG7229_CRM15
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Rouault et al., 2010, Proc. Natl. Acad. Sci. U.S.A. 107(33): 14615--14620
    Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny. [FBrf0211646]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]