A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol lab_3.6 Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000435692
Collection REDfly CRMs   Associated gene(s) lab
Genomic Location
Chromosome (arm) 3R Sequence location 3R:2,504,283..2,507,911 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000160450 FBsf0000160448 FBsf0000160449 FBsf0000163034 FBsf0000163134 FBsf0000161182 FBsf0000436621 FBsf0000161237 FBsf0000436269 FBsf0000435625 FBsf0000435820 FBsf0000436838 FBsf0000436222 FBsf0000161236 FBsf0000161242 FBsf0000436262 FBsf0000435681 FBsf0000435511 FBsf0000435748 FBsf0000435761 FBsf0000161239 FBsf0000161238 FBsf0000435692 FBsf0000435980 FBsf0000161240 FBsf0000161235 FBsf0000191135 FBsf0000230494 FBsf0000230495 FBsf0000230496 FBsf0000247755 FBsf0000276292 FBsf0000197430 FBsf0000247756 FBsf0000328317 FBsf0000264254 FBsf0000328318 FBsf0000264255 FBsf0000328319 FBsf0000264256 FBsf0000264257 FBsf0000328320 FBsf0000212281 FBsf0000369030 FBsf0000369031 FBsf0000369032 FBsf0000369033 FBsf0000369034 FBsf0000309947 FBsf0000284393 FBsf0000309948 FBsf0000284394 FBsf0000309949 FBsf0000309950 FBsf0000284395 FBsf0000423051
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Description
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FB2013_03
FB2013_02
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hide Sequence Data
Length 3629
Comments
Sequence 
TAAAATCCTATTCATAAACTAACGAGTTCGCCTGGCCCGAATTCAAATTC
AATTAAAGAGGCGGCGTACACACTTAGGACAACTCTTGGCCCATATGCAA
CAGGCATCCGTCGCCGTCTCAGCAGAGCTTGATAAACTAAATTTGGTTAA
TTAATCATTACAGGAGCGAACAAAACGCCCGAGTCAAAAGCTGCACAAAA
CCGAAAGCCCAGGAAAGAAAACGAAACAAAAAAAAAATGGCACAAATATC
GATTTACCAAAAATTACAAAGGAAACCCGAAAAGTACCGCCAAGTTTTGT
TCTTGGAGCGGTGACAGTCGGCGCCGGGCAATCCATCAATTTGGTTGCAG
TGCCAATTACGCCAGTTACTCGTCACGTCACGTCTCGAAAACCGGCGGAC
AACGGACAGTGGACAGCGGCCAACGGACACCGAAAACCGGACAGATACGG
GCTGCCGTGGGGAGACACCAGAGCTGTGTAGCAAGAATCGTATCGAACGG
CGGCACTCCAAGTTCCAGAAGTTTTGGAGCTGTAGCTGCGGCGCCCCCAT
CAACTTGGCGTCAGCTTGTGGTCAGTTTTCCACTATTCCGATCGGCTGTA
GAGGCTTGTCGCCTCTCGGGGCTGTTGGGAACGTCATCTAGCCCATATAT
CTTACTTCCGACGCTTTCATGGCGCTAAACAGACGTTGATGGCGCGACTT
ACAAATCCCCCGAAACCTATAAGGTGTGCGACGGGCACTTGACTGGACAT
TTATATGCACTAACGAGTGGTGTGGAAATAGCTTTTATGGTTAATCGATT
GTGATATGATGAACTTTACAGATATACATACATTTATATTGGGATTTGAG
TGGATCATAATTGATCAAAGCTCTATCAGATCATGATCAGAAATAATACA
ATTTTAAGGGTAATCAAATCAATGTGATTTACGAACGGTAATGCGTATAT
ATATATATATATTTACATATATTACAATACTCAATACTCAATGTACTCAA
TATGTATGAGTACATGTTTTAATTTTATTTTTGAGCTTTTAATTATGTAT
GTATGTTTATCCTGGAATATTTTTAAATATTGTATGTTTATGTTATAGAC
ATAGGAGTGTTGATCTCCCGCGCCTACAAAAAATACTAGAAAATATAGTT
GCTTCGAATTGTCAATTCAAATGGGAATTCAAATAAACAATAGAAACCTC
TATCGTAAGATATCGATACATATTACAAGACTAGCAAGCAAATTTAAAAT
ATCAAAAAAGTTGGCGTGGGAGATTTTAAAACATTTAAAAAACAAATTTG
AGCTGCGTCTTCGTCTCTCGGAAACGCCTCCTTCTGCCTGTTCAATCATT
TACAACGTATCTAGTATAAAACCTTTATACTCTACGAGTAACGTGTATGA
AAACAACTAATTAATAATTTGTACTATTACAAAGAGTTTTACATTTTAAA
AAGTCATTAATTTACCATAAACATAATGCTCTCATTACAATGGATTTACA
CAAAAGTATCGAAAAATGTCTTTATACTACTTCAGTCTTAACGTAATTTT
ATGATAAAAGAAAAAGCAGAATATATATAACTTGTTTATTGCAGCAATAT
GTTCGTGTAAGAGTAAATACATAGAGAAAGTAAATTAACGGCTTCTGCCG
TATGTACATAAATATAAATACTTAAACTTTAATGTTAAAGGCAATAACAT
CTTTGAGTTCTCAATTACGATTGTTAAACAACTTCATTACGACAAGAAAG
ATTGGCTGAGGGAGGAAGTATTGCATAACACCCCAGGAACTGTCAAAAAT
GATCCCAATCCTAGCTGAATGCTAAAACAAGGATACCTAAGCCTTGCATG
TATTTCGCTTTAGCCATGTGAGATAGTTTCAGGCTTGGAATCGGGATTGG
GCCGTGGTATGTTAGTTGTATATGTACATACATATGTATGTGATTACTGA
AAGATACTCGCACACATCCTGTTACTATTAATTGCTGCTGTCCGAAAATA
TAACAAATCACCTTGGAGCGTTGGGCAGGACCGCCCGAAAGGACGAAACG
AATGGCCACTCCAGCCGACCTCCCCCTCCGAAATTCCCCGTGCGAGTGTA
GAGACAAAAACTTGTGAAAATGTCAATCAAGTTGAACAAAAAACGAAAAA
TTCCCAATCCGAGAGTGGAAGGAGCGAACCTCGAAGTTTTCCAGACAGCC
AAAGATGATGCATTGTGCGTGAAAGGTGCATGAAGATATCTGACGGTTGT
ATCTCTATCCCTGCCAAGTGACAGACCCATACACCGGATAACTCTTAGGG
GGCGCCTACGAATTGCATCCCACTGAGTCAGAGTCAAGGTCCGGAGATAA
TGTCAGGATTCGGGGTCTGTCGGGGTCGGGGAAGTCGTTCGACGACGATT
TAAATTCAACAGTGCTGCCATAGATGAGCTGTCATATGTGCAAATGACGA
TTGACAGCTGCCACAGTCAGCATCCGTTTGCAGCTCCTCCTGGTCGCAAC
CCCGGTCCGCTCCCAAGCCGAAAACCCATTCCGAGTGCCCGGTTCGCATT
TCCAATCCCATAGCAAGCTCCTCTTCTTTACCTGTCCGTCAATTCATTTG
GGAATTTCGAGGTGCTAAAACGTGCCAAAACCGCAAAACAAACACACAAC
ATTGGGTTTCCAGTTAAAACAAGACGTCGACATGAGCATGGTCAGGGGCG
TAACTTTCAATACTATCAGCAGGCGGCAGGGGTGGATTAACTTGGACACG
AACTGGGCCCAAAACATGTGCGAAAAGATTTTCGGGGCGAAGAGTTGTCT
ACTATTTAGTATTAATAAATACACATTTTATAAAGAGAATTTAATTACAC
TTGAGAAACCATTCAGATACTTTTAACAGAGAGTACTTTAAATAATACCT
ATATAAGGAATTAAAAACAATAATAACAACAACAATTTTTTGGATTAGAG
CATAGTTTTGAATTAGTTTAAATTAGAAATAAATGGTCTTTATATTTCCC
GACTTCCATATATGGCGAAGAAGACTTCGAGTAAAACTATTATGATGATA
AGAAATAGTAAGTTTTTCTAATTGGCATACGGGAAGTGAATTGTCAATTG
GATGTTTCAAAACATTTTAAGTAAGATCTAGAACAAGTTTCTTTAAAATG
CTTAATGTTCTTAGGTGGACCGACGATCTATATAAGTGTTTCCCATTAAT
AAGGATCATTTTAGAGATCTGATCATCCCCAGCCAGTTCCACACCAGCTC
ATTGCATAATTTCAAGTTCCTTCATAGAACTCCCATCTTGAGTAGCCGTC
AATCCGCTCCTGCCATGGCGACTAGCAAAAAAAAAACGAGCAAACAGGGA
ACGAGAAAATCTAAATGGAAACGGCAACTGCCAAAAACCGGTAGTTGAAA
TACGGGTATTTGTATATACGTATGACTAACCCCCGAACCACTGATAAGGG
CAGTCATCCGAAGAATCCCAGGGAGCGAGCGAGACGGCAGTCGCAACACG
TATGTAGCACACACGAGAGGAAGCGGGACCACAGGCAGTCTGCAGAGGGG
CGTGGCCAAGACCAGCGGTTGTGCGGTCTGAAAGAAACCGGGTTCGGGCC
AGTAATCAGTCACGACTTGGTAAGCGCGC
hide Associated Information
Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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hide Progenitors
PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
lab_3.6
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Chouinard and Kaufman, 1991, Development 113(4): 1267--1280
    Control of expression of the homeotic labial (lab) locus of Drosophila melanogaster: evidence for both positive and negative autogenous regulation. [FBrf0053767]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]