A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol mira_PE Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000436252
Collection REDfly CRMs   Associated gene(s) mira
Genomic Location
Chromosome (arm) 3R Sequence location 3R:15,757,263..15,762,495 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000436252 FBsf0000292637 FBsf0000271167 FBsf0000267244 FBsf0000274149 FBsf0000232573 FBsf0000267245 FBsf0000232574 FBsf0000271168 FBsf0000232575 FBsf0000271169 FBsf0000271170 FBsf0000292638 FBsf0000232576 FBsf0000292639 FBsf0000232577 FBsf0000334280 FBsf0000248806 FBsf0000251989 FBsf0000276689 FBsf0000251990 FBsf0000248807 FBsf0000276690 FBsf0000265511 FBsf0000329858 FBsf0000265512 FBsf0000329859 FBsf0000265513 FBsf0000329860 FBsf0000265514 FBsf0000329861 FBsf0000265515 FBsf0000329862 FBsf0000329863 FBsf0000265516 FBsf0000329864 FBsf0000265517 FBsf0000329865 FBsf0000212975 FBsf0000212976 FBsf0000373333 FBsf0000373334 FBsf0000373335 FBsf0000373336 FBsf0000373337 FBsf0000312892 FBsf0000285938 FBsf0000294521 FBsf0000312893 FBsf0000285939 FBsf0000294522 FBsf0000312894 FBsf0000285940 FBsf0000289529 FBsf0000312895 FBsf0000312896 FBsf0000285941 FBsf0000312897 FBsf0000285942 FBsf0000273100 FBsf0000312898 FBsf0000285943 FBsf0000273101 FBsf0000424460
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Description
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FB2013_03
FB2013_02
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hide Sequence Data
Length 5233
Comments
Sequence 
AAATGATGTTGAAGGTGTCGCGGCGTAGGGTAAATGTCATTAACATCATT
AATATTACTGTGAGTCCTGCACATCATTGGATCAGCGAATAATGAAAACC
CTTTTTCGTAAAATTTCCATTTTTATTATAAGAGAGTTTGGGAAAATCAA
ATGCAAATATGTTTATGGGAAAATATTACCTCTATGAAACCAAAGGATGG
TTTCGTAACCTTATATACATACATATTATGTACATGAACTATATAAATTG
ACAAAGGTTGTGAAGCATAAATATAAATTAAAAAGTAATGCTTGAGTATT
AATATTCTATTGATTTCCAAACGATTTCCCTTGTCCTATGGCTCCCTACA
TTGTCTTTCTACATTATAATTCTTTTGCACAGCTGTGTGTGGCTGACCCA
CCCAGAATTTCATGCTTGTCTGCTTTAACCTAGAATTATCACCTCCCAGT
TGCTAGAATCTTCCGGTCATTGTTTGCCATCAAAGGAACAACCAGCTGAT
TTCAGTTGGCAGTTGTGACAAACTCACTGGAGAAAAGAAGTGAAAAAATG
ACAGGATGCACAGGCAGCTACCGCAGGATCAGCAGGATATCATGAGGGGG
TTCTCTATACAGATTATAGATGGCCGATTGCCCAACTGCCTAGCGATATC
ACATGAAAAATCAATTTTCCCGACGCATTTCCATTTTCCATGCAATTCAT
TTAGCCTCAATTCCATTCAACTCATTGCGCAGGCGCAACTCGCCCATTTC
CGACGCATTTTCCTTTAATTATGCGGGCATCGGATTTCGTATCAAATTAA
CGAATTATGCTGGCTGCCAGCTGTGTTGGAGCTAACGGATGAGGCAGTCC
ATCCAGCCATCAGCTCATATCCTTGTACTCGTAGTCTCGCAATTCTCGAA
AGCAATCGCATTTACTTGTAGTCCTCGAAGGAAAGGAGAAGCCCAGGCAG
ATGTGAGTGAGTGTGTCTCTGTTCGTCGGCAACGGCACATTTCCCATATG
TACTTAAGCCGGGGAATGCGGAACCCCGTCGTCCTATCTCCACCCCTACC
CATCTTGCTACCCCCACTCCGGTCTCGAACCCTCCTCGTGCTGTCTTGAA
CTACAATTGCAACATTTGCGCGCGCTAAAATGAAAACATTTCCTTTATAT
ACACGAGGCCGACGTCTTGACAAACACACAGATAAGACGAACAGGGGATC
AAGAACTGTGGCACGAACTACCACCAAATAAAAAAAAAATTAGGAGTCGT
ATAACTCGGCTTACCTGAATTCTAGATACTCTTAAAAGAGGACATTATAG
AAAATATATAATATTATATGTTTAATTTAAATTGAAAAGTGGTTAAGATC
AGAAGAATTATGCCGTCTGCAAATGACTTGTCTAATATTAAATTAACATT
AGAATGTTTAAGGAATATGAAATTTTTGTTCAGCTAATATCTAAAAAATC
CAAAATTGTCGTGATATTATTTTCTATGTCCACTAATTATTATATTCAAT
GTTAATGTTATTAGATTAAAATGAAAGTCCTACGAAATGAAAACCATAAA
CCATTTTTCGTTTGAAGATCTCGGAAATACCCAACCTGAAATGTTGGGTA
TATCCCACATAGGTGAAGCAATGCAGGATCGTTGAAGCGACCCCTGCTCG
AGCGAGGGTTGTTTTCTTTGCCTCCCCTGGGTCTATCTCGTTTCCACACT
CTATCCATCCCTTTTCCACTCGCTGTGCCAGCTGGAGGCTATGTCTGCCT
CAGGGATCTTGGACAGAAGGTGAGCTCAGTTAGGTTTTGACAGCGGAACG
CGTAGGTACAGTGAAACGGGTAGCAACGGGATAGCGGGTTTAGTGTAGCA
CAGAACGGACCACAAAGTACAGATGAATTAAATACGACTACAGACTACTA
CCATATTGTTAAACAGTTTACCTAAAAATCCTAAGGAAAAGATAACCAAA
TTAAACCGAAAGTTAAAGTTGTGTTTATGTTTGATCGTTGAGTTATTGTT
ATATCGAAAGTTAAACGAGCGTTGTTAATGAGACATTGATACAAAATCCG
AAAAGAATCGTTACCAAGTTAAACCGAAAGTCCAAAAAACAAATTCGAAA
ATGTCTTTCTCCAAGGCCAAGTTGAAGCGTTTCAACGACGTGGATGTGGC
CATCTGCGGTTCGCCAGCTGCGTCCAACAGCTCGGCGGGATCGGCGGGCA
GTGCCACGCCCACCGCGTCTTCGGCAGCCGCTGCTCCGCCAACCGTTCAA
CCGGAACGCAAGGAGCAGATCGAGAAGTTCTTCAAGGACGCCGTGCGTTT
CGCGTCCAGCTCGAAGGAGGCCAAGGAATTTGCCATTCCCAAGGAGGACA
AAAAGTCAAAGGGATTACGTCTGTTCCGTACTCCTTCGTTGCCGCAGCGC
CTACGCTTCCGTCCGACTCCCAGTCACACGGATACGGCCACCGGAAGCGG
AAGTGGCGCCTCAACAGCGGCATCCACTCCTCTGCATTCGGCAGCCACCA
CGCCCGTAAAGGAGGCCAAGTCAGCCAGCCGTCTGAAGGGCAAGGAGGCA
CTCCAGTACGAAATCCGTCACAAAAACGAACTGATCGAGAGCCAGTTGAG
CCAACTGGACGTGCTGCGCCGCCATGTGGATCAGTTGAAGGAAGCCGAGG
CCAAGTTGCGCGAGGAGCATGAGTTGGCTACCTCCAAGACAGATCGGCTC
ATCGAAGCCCTGACCAGTGAGAATTTATCGCACAAAGCTCTGAACGAGCA
GATGGGCCAGGAGCACGCTGATCTTTTGGAGCGTTTGGCCGCCATGGAGC
AGCAGTTGCAGCAACAGCACGACGAGCATGAAAGGCAAGTGGAGGCGTTG
GTTGCCGAGAGCGAGGCACTGCGTCTGGCCAACGAGCTGCTGCAGACAGC
GAATGAGGATCGTCAAAAGGTGGAGGAGCAGCTGCAGGCACAACTCTCTG
CTCTTCAGGCGGATGTGGCTCAGGCCCGCGAGCACTGCAGCCTGGAGCAG
GCAAAGACCGCCGAGAACATTGAGCTGGTAGAGAATCTCCAGAAGACCAA
TGCCTCCCTGCTGGCCGACGTGGTCCAGCTGAAGCAGCAGATCGAACAGG
ATGCCCTGTCCTACGGACAGGAGGCCAAGAGCTGCCAGGCGGAACTGGAG
TGTCTGAAGGTGGAGCGCAACACCCTGAAGAATGACTTGGCCAACAAGTG
CACTCTGATCCGCTCGCTGCAAGACGAGCTTCTCGACAAGAACTGCGAGA
TCGATGCTCACTGCGATACCATTCGCCAGCTGTGCCGGGAACAGGCTCGC
CACACCGAGCAGCAGCAGGCGGTGGCCAAGGTGCAGCAGCAGGTTGAGAG
CGACCTAGAGAGCGCGGTGGAGCGCGAGAAGAGCTACTGGCGCGCCGAGC
TGGACAAGCGCCAGAAGCTGGCCGAGAACGAGCTGATCAAGATCGAGCTG
GAGAAGCAGGACGTGATGGTGCTGCTGGAGACCACCAATGATATGCTGCG
CATGCGCGACGAGAAGCTGCAGAAATGCGAAGAGCAGTTGCGCAACGGCA
TCGACTACTACATCCAGCTGAGCGACGCACTGCAGCAGCAGCTGGTGCAG
CTGAAGCAGGACATGGCCAAGACGATCACCGAGAAGTACAACTACCAGCT
GACTTTGACCAACACCCGGGCCACCGTCAACATTCTGATGGAGCGTCTAA
AGAAGTCCGATGCGGATGTGGAGCAGTACCGAGCGGAGCTGGAATCGGTG
CAGTTGGCCAAGGGAGCGCTGGAGCAGAGCTATCTGGTGTTGCAGGCGGA
CGCAGAGCAACTGCGCCAGCAATTGACCGAGAGCCAGGATGCGCTCAACG
CACTGAGATCCTCCTCCCAGACGCTGCAGAGCGAGGTATCGTTGAAGGAG
TCCTTGCTCCACGAGCTGCTAGCCGGCGAGGCGGAGACGTTGGCTAAATT
CAATCAGATTGCAAACTCGTTCCAGGAGCGCATCGATGGCGACGCCCAGT
TGGCCCACTACCACGAGCTGCGCCGCAAGGACGAGACGCGCGAGGCCTAC
ATGGTGGACATGAAGAAGGCGCTCGATGAATTCGCCACCGTGCTGCAGTT
CGCCCAATTGGAGCTGGACAACAAGGAGCAGATGCTTGTTAAGGTGCGCG
AGGAGTGCGAACAGCTCAAGCTGGAGAACATTGCCCTCAAGTCCAAGCAA
CCGGGATCCGCCTCTCTGCTGGGAACACCTGGCAAGGCCAACCGCTCCAA
TACCACCGATCTGGAGAAGATCGAGGATCTGCTGTGCGACTCGGAGCTGC
GATCCGACTGCGAGAAGATCACCACGTGGCTGCTCAACTCCTCGGACAAG
TGCGTGCGCCAGGATACCACCAGCGAGATCAACGAGCTCCTGTCCGCCGG
CAAGTCCTCGCCCCGTCCCGCCCCCCGCACACCCAAGGCGCCGCACACCC
CGCGCAGTCCGCGCACCCCCCACACCCCACGAACACCACGATCGGCGGCC
AGCACTCCCAAGAAGACTGTCCTGTTCGCCGGCAAGGAGAACGTGCCCAG
TCCGCCACAGAAGCAGGTGCTCAAGGCGCGCAACATCTAGGCTATTCCTT
TGTAACAACTACTCTATCGTACTATTATAAATTATATACCTTAGCTAAGA
TCCGATTCGAAATATAATCAATACACGTTGCACACAACACAGCCAGAGGT
GTTTCTGAAATCTCTTTCGAGCACTCTCCGACTAAATTCCAAATCTGATT
GTTTTCTATCTTTCGCGTTTGTGTTCTGGAAATATGGGACTTACCTAATC
TCATAAAAAATATCATTTTGATGCAATGCATTTTAAGGCATGAGAAATCA
AATAAAAAATCTGAAAAAGGTGTCTTGGAAAGTGAGACCTTCTTTAAAGC
TATTTAAATTAAATAGACTCATCTTTGAATGTAACGAAAATAATGAGAAT
GCATCAATTATTTTTTCCATTTATTAGCCAATTTATTCATATAAGGTCAA
ATTATCTGTAAAAAAAAAAAAGAAATAAAAGGTATTCTGATCTAAAATGT
AGAAGTGTACAGTATCATCACCTTGAACTTCGTTCTTAAAATACGTTATA
TCTTGTATATGCATTTAAAAAAGCCTGTACCTAAAGAATCAGGAAATTGT
TTACGTTTTTCATACCAACCCCGTGCAACTCGTTTTTGATTTCGATGTGG
TGGAATTTTCTCATGCTGAAACTCCTCGTTGAA
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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hide Progenitors
PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
mira_PE
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Reeves and Posakony, 2005, Dev. Cell 8(3): 413--425
    Genetic programs activated by proneural proteins in the developing Drosophila PNS. [FBrf0183881]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]