A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol CecA1_prom Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000436329
Collection REDfly CRMs   Associated gene(s) CecA1
Genomic Location
Chromosome (arm) 3R Sequence location 3R:26,036,278..26,036,669 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000160033 FBsf0000436069 FBsf0000436329 FBsf0000435753 FBsf0000186726 FBsf0000262913 FBsf0000376621 FBsf0000314766
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Length 392
Comments
Sequence
TAGAGTAAATTTGAATTTGACTGTCTTAGAAAGATAGAAAGAGATCAATT
CAAAATGCCAAAAGGATAGAGTTATTAAAGCTCTAATTCAAATTGGCCCA
GAACCGTTTAAAGGATATTACAATTTGTAATTTACATATTTGGATTATAG
CATTGAAATCCCCGATTGTTCCCTAGATGTGCAGATGTGTGCTTGGAATC
AGATCGGTTACCTTCAGTGTACTTTTCTCTGCAAAAATCCCCGTGCATGC
CTTATCTGTCATTTTGTTTTTCAAGCTGGCTGTTCGCCTATAAAAGCTCT
CGCCTTTTGTATCGCAGTCATCAGTCGCTCAGACCTCACTGCAATATCAA
TATCTTTAGCTTCTCCTAAGAAAAAATCAAGAAAATATCACC
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
Primer 1
Primer 2
Comments
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hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
Additional data
Cell lines
Observed in
Not observed in
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REDfly
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
CecA1_prom
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Senger et al., 2004, Mol. Cell 13(1): 19--32
    Immunity regulatory DNAs share common organizational features in Drosophila. [FBrf0167880]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]