A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: regulatory_region

General Information
Symbol Sox15_regionC Species D. melanogaster
Feature type regulatory_region FlyBase ID FBsf0000436665
Collection REDfly CRMs   Associated gene(s) Sox15
Genomic Location
Chromosome (arm) 2R Sequence location 2R:10,097,476..10,097,967 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBsf0000435238 FBsf0000436665 FBsf0000435662 FBsf0000436450 FBsf0000436289 FBsf0000436630 FBsf0000186354 FBsf0000274418 FBsf0000199340 FBsf0000356617 FBsf0000356618 FBsf0000302072 FBsf0000280304 FBsf0000302073 FBsf0000280305 FBsf0000302074
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Sequence Data
Length 492
Comments
Sequence 
CGTATTAGCTAGCCATTTCAGCTGACTGACTTTCGTAGTTTCCGACGGGA
AATTCCCGTCTACAAATTGGCTGGAATTATGAATGGAAATGAAGCCATGA
AATTAAATTAAGTACAGATGAAAAGCTCTGATAAGTCCGCACACACTTTT
CGTAAGAAATTCGAAACCGAAAATCACAATTAAGAATGTCTCATGGGCGA
AAGCCTGTCGCATTTTTCGTCACATTTTCCAAATCTTCCTGCTTGGGATT
GGCTCATCACGGGACGGGGCATTTCATTTCATTCAGTTTGATCTTTTATG
GCTGCCCCATAAATCAAGTCAAGGCTGCGATCTACCTAAAGTTTGCTAAC
TTCGTTTTCAATCTAAATAGTTTTCAATATCAAATAAAATTCTATGGCCA
ATAAACAACCATCTGTATATGTGGATTTCCAATCAATGTTTGAAAATTAA
TTAAGGCTTTACCGTGACTAAGCTGGATTGGAAATGCATATA
hide Associated Information
Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
hide Experimental Data
hide Progenitors
PCR template
Primer 1
Primer 2
Comments
hide Collection Information
hide Collection: REDfly CRMs
Symbol REDfly CRMs
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Experimentally validated, minimal functional cis-regulatory regions (CRMs) curated from the literature by REDfly (version 3.0).
(Halfon, 2012.6.19)
Additional data
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
REDfly
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Sox15_regionC
 
Secondary FlyBase IDs
    hide References ( 2 )
    Research paper
    Miller et al., 2009, Dev. Biol. 329(2): 386--399
    Complex interplay of three transcription factors in controlling the tormogen differentiation program of Drosophila mechanoreceptors. [FBrf0207969]
    Personal communication to FlyBase
    Halfon, 2012.6.19, REDfly CRMs and TFBS as mapped FlyBase features.
    REDfly CRMs and TFBS as mapped FlyBase features. [FBrf0218775]