FB2025_01 , released February 20, 2025
Sequence Feature: Dmel\VT055139
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General Information
Symbol
Dmel\VT055139
Species
D. melanogaster
Feature type
FlyBase ID
FBsf0000934392
Collection
Associated gene
Genomic Location
Chromosome (arm)
X
Sequence location

X:1,057,103..1,059,255

Genomic Maps
Sequence Data
Length
Comments
Associated Information
Gene(s) (targeted or local)
    Allele(s)
      Transcripts(s)
        Polypeptide(s)
          Construct
            Experimental Data
            Progenitors
            PCR template
            Primer 1
            CACAGAGGAGGCATCTAAGCCCCAA
            
            Primer 2
            GCATTTTCCATTTTCCATTTCAGCGTC
            
            Comments
            Collection Information
            Collection: VDRC-VT
            Symbol
            Title
            A set of GAL4 transgenes under the control of putative enhancer fragments.
            Source and Progenitors
            Species of derivation
            D. melanogaster
            Strain of derivation
            Vector of progenitor construct
            Description

            A collection of stocks carrying GAL4 transgenes fused to putative enhancer fragments from selected D. melanogaster genes; a targeted insertion site is used.

            Additional data
            Sample preparation
            Collection preparation

            7,705 candidate enhancer sequences were PCR amplified from genomic DNA, covering 13.5% of the entire non-coding and non-repetitive genome; genomic fragments were 2kb on average, and typically overlapped ~400bp to avoid splitting enhancers. Candidate enhancer fragments were cloned into the pBPGUw vector, upstream of a Drosophila synthetic core promoter (DSCP) that contains the TATA, Inr, MTE, and DPE sequence motifs, and a Scer\GAL4 reporter gene. These constructs were integrated into the P{CaryP}attP2 target element on chromosome 3L by phiC31 site-specific integration, as described elsewhere (FBrf0205679).

            Mode of assay
            Data analysis
            Cell lines
            Observed in
            Not observed in
            Comments
            Stocks (1)
            External Crossreferences and Linkouts ( 0 )
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            VT055139
            Secondary FlyBase IDs
              References (3)