A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dsim\17.6

General Information
Symbol Dsim\17.6 Species D.simulans
Name 17.6 FlyBase ID FBte0000110
Feature type natural transposable element
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2013_03
FB2013_02
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hide Sequences & Components
Complete element (bp)
Terminal repeat (bp)
Reference sequence transposon_sequence_set.embl.txt.gz
Component genes
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hide Sequence Ontology (SO)
Transposon type
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Copy number
and comments
TE copies retrieved from the CAF1 assembly (from AAA) of the mosaic assembly of genomes from different strains of D. simulans.:9
Search for
Target Site Duplication
Size (bp)
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Curated drosophilid orthologs
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Sequence Crossreferences
 
Other Crossreferences
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
Dsim\17.6
 
Name Synonym
17.6
 
Secondary FlyBase IDs
  • FBgn0029253
hide References ( 3 )
Research paper
Lerat et al., 2011, Gene 473(2): 100--109
Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes. [FBrf0212990]
Biemont and Cizeron, 1999, Genetica 105(1): 43--62
Distribution of transposable elements in Drosophila species. [FBrf0111330]
Vieira et al., 1999, Mol. Biol. Evol. 16(9): 1251--1255
Wake up of transposable elements following Drosophila simulans worldwide colonization. [FBrf0111510]