Drec\R2-element

General Information
Symbol	Drec\R2-element	Species	D.recens
Name	R2-element	FlyBase ID	FBte0000116
Feature type	natural transposable element
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Sequences & Components
Complete element (bp)
Terminal repeat (bp)
Reference sequence	transposon_sequence_set.embl.txt.gz
Component genes	Drec\R2-element\ORF
Sequence Accessions
	DDBJ/EMBL/GenBank U81820
Sequence Ontology (SO)
Transposon type	non_LTR_retrotransposon transposable_element
Insertions & Copy Number
Copy number and comments
Search for	All insertions of this transposon Insertions in the sequenced genome Insertions in other genomes
Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs	Dmel\R2-element
Comments
	Analysis of 5' junction sequences of 94 R2-elements from 14 species reveals that no sequences at the 5' end of the R2-element appear to be required for element integration. A model in which the R2-element reverse transcriptase is capable of switching templates from the R2-element RNA transcript to the upstream 28SrRNA gene can best explain the observed 5' junction sequences. (George et al., 1996)
Other Information
Etymology

External Crossreferences
Sequence Crossreferences
	DDBJ/EMBL/GenBank U81820
Other Crossreferences

Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	Drec\R2-element
Name Synonym	R2-element R2 element (Ruschak et al., 2004)
Secondary FlyBase IDs
	FBgn0016319
References ( 5 )
Research paper	Ruschak et al., 2004, RNA 10(6): 978--987 Secondary structure models of the 3' untranslated regions of diverse R2 RNAs. [FBrf0175117] Gentile et al., 2001, Mol. Biol. Evol. 18(2): 235--245 Multiple lineages of R1 retrotransposable elements can coexist in the rDNA loci of Drosophila. [FBrf0132406] George and Eickbush, 1999, Insect Mol. Biol. 8(1): 3--10 Conserved features at the 5 end of Drosophila R2 retrotransposable elements: implications for transcription and translation. [FBrf0106529] Lathe and Eickbush, 1997, Mol. Biol. Evol. 14(12): 1232--1241 A single lineage of R2 retrotransposable elements is an active, evolutionarily stable component of the Drosophila rDNA locus. [FBrf0099899] George et al., 1996, Genetics 142(3): 853--863 Analysis of the 5' junctions of R2 insertions with the 28S gene: Implications for non-LTR retrotransposition. [FBrf0086414]