FlyBase Natural Transposon Report: Dmel\invader3

General Information

Symbol

invader3

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000619

Sequences and Components

Complete element (bp)

5484

(Kaminker et al., 2002)

Terminal repeat (bp)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

invader3\ORF

Sequence Accessions

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

AF363628

Sequence Ontology (SO)

Transposon type

LTR_retrotransposon

(Mugnier et al., 2008, Lipatov et al., 2005, Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

transposable_element

(Mugnier et al., 2008, Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

Insertions and Copy Number

Copy number and comments

16 in euchromatin of Release 3 genome annotation, of which 3 are full length.

(Kaminker et al., 2002)

Search for

Target Site Duplication

Size (bp)

(Linheiro and Bergman, 2012)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 1 )

Crossreferences

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

AF363628

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

INVADER3

(Rigal et al., 2022, Satyaki et al., 2014, Olivieri et al., 2012)

INVADER3_I

(Gunawardane et al., 2007)

INVADER_3

(Saint-Leandre et al., 2020)

Invader 3

(Hamilton et al., 2009)

Invader3

(de Oliveira et al., 2021, Kapitonov and Jurka, 2003)

anon-A210

Secondary FlyBase IDs

FBgn0046865
FBgn0063428
FBtp0017067

References (38)

Report Sections