Open Close
General Information
Symbol
Burdock
Species
D. melanogaster
Feature type
FlyBase ID
FBte0000739
Sequences and Components
Complete element (bp)

6411

Terminal repeat (bp)

277

Component genes
Sequence Accessions
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Sequence Ontology (SO)
Insertions and Copy Number
Copy number and comments

6411 in euchromatin of Release 3 genome annotation, of which 13 are full length.

Target Site Duplication
Size (bp)

4 (TATA in the case of the insertions into the ct hotspot)

Orthologs
Curated drosophilid orthologs
Comments

YNNUTUTUYAYA (Y = pyrimidine, U = purine).

A Burdock insertion in the ct locus (ctMR21K1) is sequenced. The element is found to be a short retrotransposon with long terminal repeats and a single open reading frame.

Nucleotide position -123 of the ct locus is a hotspot for Burdock element insertions.

Other Information
Etymology
External Crossreferences and Linkouts ( 5 )
Crossreferences
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Synonyms and Secondary IDs (6)
Reported As
Symbol Synonym
Burdock element
HDC14603
Secondary FlyBase IDs
  • FBgn0010302
  • FBtp0011417
References (90)