Dmel\mariner2

General Information
Symbol	Dmel\mariner2	Species	D.melanogaster
Name	mariner2	FlyBase ID	FBte0001033
Feature type	natural transposable element
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Sequences & Components
Complete element (bp)	912 (Kaminker et al., 2002)
Terminal repeat (bp)
Reference sequence	transposon_sequence_set.embl.txt.gz
Component genes
Sequence Accessions
	DDBJ/EMBL/GenBank
Sequence Ontology (SO)
Transposon type	terminal_inverted_repeat_element (Kaminker et al., 2002, Kapitonov and Jurka, 1997-) transposable_element (Kaminker et al., 2002, Kapitonov and Jurka, 1997-)
Insertions & Copy Number
Copy number and comments	17 in euchromatin of Release 3 genome annotation, of which 4 are full length. (Kaminker et al., 2002)
Search for	All insertions of this transposon Insertions in the sequenced genome Insertions in other genomes
Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs
Comments

Other Information
Etymology

External Crossreferences
Sequence Crossreferences
	DDBJ/EMBL/GenBank
Other Crossreferences

Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	mariner2 (FlyBase, 1992-, Petrov et al., 2011, Smith et al., 2007, Deloger et al., 2009, Kawamura et al., 2008)
Name Synonym	mariner2
Secondary FlyBase IDs
	FBgn0063401 FBtp0017072
References ( 8 )
Research paper	Petrov et al., 2011, Mol. Biol. Evol. 28(5): 1633--1644 Population genomics of transposable elements in Drosophila melanogaster. [FBrf0214125] Deloger et al., 2009, Gene 439(1-2): 55--62 Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. [FBrf0207990] Kawamura et al., 2008, Nature 453(7196): 793--797 Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells. [FBrf0205455] Smith et al., 2007, Science 316(5831): 1586--1591 The Release 5.1 annotation of Drosophila melanogaster heterochromatin. [FBrf0216199] Kaminker et al., 2002, Genome Biol. 3(12): RESEARCH0084 The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. [FBrf0155828]
Personal communication to FlyBase	Ashburner, 2002.8.15, te updates. te updates. [FBrf0151627] Kapitonov and Jurka, 1997-, A reference collection of Drosophila repetitive sequences. (Computer file) A reference collection of Drosophila repetitive sequences. (Computer file) [FBrf0151607]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]