Dmel\gypsy11

General Information
Symbol	Dmel\gypsy11	Species	D.melanogaster
Name	gypsy11	FlyBase ID	FBte0001041
Feature type	natural transposable element
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Sequences & Components
Complete element (bp)
Terminal repeat (bp)
Reference sequence	transposon_sequence_set.embl.txt.gz
Component genes
Sequence Accessions
	DDBJ/EMBL/GenBank
Sequence Ontology (SO)
Transposon type	LTR_retrotransposon transposable_element (Kapitonov and Jurka, 2003)
Insertions & Copy Number
Copy number and comments
Search for	All insertions of this transposon Insertions in the sequenced genome Insertions in other genomes
Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs
Comments

Other Information
Etymology

External Crossreferences
Sequence Crossreferences
	DDBJ/EMBL/GenBank
Other Crossreferences

Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	Gypsy (Rozhkov et al., 2010) gypsy11 (Czech et al., 2008, Kawamura et al., 2008, Li et al., 2009)
Name Synonym	gypsy11
Secondary FlyBase IDs
	FBgn0067386 FBtp0019273
References ( 8 )
Research paper	Rozhkov et al., 2010, RNA 16(8): 1634--1645 Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. [FBrf0211292] Li et al., 2009, Cell 137(3): 509--521 Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies. [FBrf0208736] Czech et al., 2008, Nature 453(7196): 798--802 An endogenous small interfering RNA pathway in Drosophila. [FBrf0205160] Kawamura et al., 2008, Nature 453(7196): 793--797 Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells. [FBrf0205455] Kapitonov and Jurka, 2003, Proc. Natl. Acad. Sci. U.S.A. 100(11): 6569--6574 Molecular paleontology of transposable elements in the Drosophila melanogaster genome. [FBrf0160656] Kapitonov and Jurka, 2002, Repbase Reps 2(11): 7 GYPSY11, an old family of Gypsy-like endogenous retroviruses in drosophila. [FBrf0159442] Kapitonov and Jurka, 2002, Repbase Reps 2(11): 6 GYPSY11, an old family of Gypsy-like endogenous retroviruses in drosophila. [FBrf0159441]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]