A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}l(3)j1B9j1B9 Insertion

General Information
Symbol Dmel\P{lacW}l(3)j1B9j1B9 Species D. melanogaster
Name FlyBase ID FBti0004905
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) Ecol\lacZ, l(3)j1B9 Viability / fertility
Causes allele(s) Ecol\lacZj1B9, l(3)j1B9j1B9 Stock availability 2 publicly available
LINE ID l(3)j1B9
Genomic Location
Chromosomal location 3R ( 85A5 ) Sequence location 3R:4,495,369..4,495,369 [+]
Map ( GBrowse ) detailed view FBti0109930 FBti0047607 FBti0106289 FBti0102220 FBti0109996 FBti0039957 FBti0108044 FBti0003112 FBti0024879 FBti0034680 FBti0038825 FBti0035095 FBti0125974_2 FBti0046221 FBti0125974_1 FBti0042990 FBti0064829 FBti0125975_2 FBti0125975_1 FBti0112354 FBti0028713 FBti0105835 FBti0007902 FBti0107540 FBti0030086 FBti0069532 FBti0108862 FBti0055971 FBti0011377 FBti0021129 FBti0039858 FBti0028424 FBti0105674 FBti0112777 FBti0059262 FBti0102896 FBti0054344 FBti0034825 FBti0016501 FBti0004905 FBti0036223 FBti0143486 FBti0143587 FBti0043780 FBti0100050 FBti0048001 FBti0043332 FBti0065071 FBti0048093 FBti0072435 FBti0125976 FBti0065174 FBti0041315 FBti0105407 FBti0132327 FBti0100871 FBti0044180 FBti0049735 FBti0050837 FBti0038854
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:4,495,369..4,495,369 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
85A5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
85A9-85A10 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ026291
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999)
l(3)j1B9
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZj1B9
(BDGP Project Members, 1994-1999)
l(3)j1B9j1B9
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)j1B9
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
10228
y1 w1118; P{lacW}l(3)j1B9j1B9/TM3, Sb1
Kyoto
111031
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{neoFRT}82B P{lacW}l(3)j1B9j1B9/TM6B, P{Car20y}TPN1, Tb1
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hide Comments
Location 3R:4495369-4495370 confirmed by FlyBase alignment of dbGSS accession AQ026291 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}l(3)j1B9j1B9
(FlyBase, 2005, BDGP Project Members, 1994-1999, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]