A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}l(3)j5B6j5B6 Insertion

General Information
Symbol Dmel\P{lacW}l(3)j5B6j5B6 Species D. melanogaster
Name FlyBase ID FBti0004972
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, l(3)j5B6 Viability / fertility
Causes allele(s) Ecol\lacZj5B6, l(3)j5B6j5B6 Stock availability 2 publicly available
LINE ID l(3)j5B6
Genomic Location
Chromosomal location 3L ( 66D12 ) Sequence location 3L:8,759,482..8,759,482 [+]
Map ( GBrowse ) detailed view FBti0068625 FBti0023185 FBti0102824 FBti0070674 FBti0036658 FBti0070346 FBti0028712 FBti0068178 FBti0052836 FBti0027941 FBti0067552 FBti0049713 FBti0112616 FBti0007947 FBti0106086 FBti0029954 FBti0068763 FBti0112673 FBti0108462 FBti0106385 FBti0072844 FBti0034721 FBti0100853 FBti0028401 FBti0102207 FBti0008047 FBti0004972 FBti0056905 FBti0034372 FBti0030105 FBti0068725 FBti0111833 FBti0005434 FBti0046440 FBti0049453 FBti0057351 FBti0069334 FBti0102652 FBti0067516 FBti0047277 FBti0037599 FBti0050251 FBti0067406 FBti0043826 FBti0066680
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:8,759,482..8,759,482 [+]
(BDGP Project Members, 1994-1999)
Orientation
-
(Ring et al., 2000)
Cytological location
(computed by FlyBase)
66D12 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
66D13-66D14 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ034090
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999)
l(3)j5B6
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZj5B6
(BDGP Project Members, 1994-1999)
l(3)j5B6j5B6
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Lethality
References
lethal | recessive
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage  
embryonic/larval fat body  
(Meister and Braun, 1995.10)
Additional Information
Statement
Reference
In wandering third instar larva, very weak β-gal signal in fat body.
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
l(3)j5B6
(Meister and Braun, 1995.10)
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)j5B6
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
12073
y1 w*; P{lacW}l(3)j5B6j5B6/TM3, Sb1
Kyoto
111384
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{lacW}l(3)j5B6j5B6 P{neoFRT}80B/TM6B, P{Car20y}TPN1, Tb1
hide Linkouts
hide Comments
Location 3L:8740329-8740330 confirmed by FlyBase alignment of dbGSS accession AQ034090 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
5DP
(FlyBase, 1992-)
P2073
(Meister and Braun, 1995.10)
P{lacW}-j5B6
(Ring et al., 2000)
P{lacW}l(3)j5B6j5B6
(FlyBase, 2005, BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{w+mC=lacW}l(3)j5B6j5B6
(FlyBase, 1992-)
Secondary FlyBase IDs
  • FBti0001187
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Ring et al., 2000, Genome Res. 10(10): 1605--1616
Construction and transposition of a 100-kilobase extended P element in Drosophila. [FBrf0130042]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
Personal communication to FlyBase
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]