A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}l(3)j5C7j5C7 Insertion

General Information
Symbol Dmel\P{lacW}l(3)j5C7j5C7 Species D. melanogaster
Name FlyBase ID FBti0004975
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, l(3)j5C7 Viability / fertility
Causes allele(s) Ecol\lacZj5C7, l(3)j5C7j5C7 Stock availability 2 publicly available
LINE ID l(3)j5C7
Genomic Location
Chromosomal location 3R ( 93A4 ) Sequence location 3R:16,782,871..16,782,871 [+]
Map ( GBrowse ) detailed view FBti0029253 FBti0106012 FBti0056685 FBti0025297 FBti0143636 FBti0143728 FBti0004975 FBti0056367 FBti0055576 FBti0111038 FBti0066395 FBti0043948 FBti0048461 FBti0110962 FBti0107208 FBti0106290 FBti0011748 FBti0107389 FBti0105231 FBti0005421 FBti0076897 FBti0070120 FBti0036586 FBti0039672 FBti0099718 FBti0009887 FBti0011647 FBti0110022 FBti0034519 FBti0112210 FBti0111997 FBti0037530 FBti0068996 FBti0068793 FBti0111072 FBti0102970 FBti0025605 FBti0070770
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:16,782,871..16,782,871 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
93A4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
93A4-93A5 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ026324
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999)
l(3)j5C7
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZj5C7
(BDGP Project Members, 1994-1999)
l(3)j5C7j5C7
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage  
embryonic/larval midgut | restricted  
(Meister and Braun, 1995.10)
Malpighian tubule  
(Meister and Braun, 1995.10)
embryonic/larval hindgut  
(Meister and Braun, 1995.10)
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)j5C7
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
12146
y1 w*; P{lacW}l(3)j5C7j5C7/TM6B, Tb1
Kyoto
111419
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{neoFRT}82B P{lacW}l(3)j5C7j5C7/TM6B, P{Car20y}TPN1, Tb1
hide Linkouts
hide Comments
Location 3R:16782871-16782872 confirmed by FlyBase alignment of dbGSS accession AQ026324 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P2146
(Meister and Braun, 1995.10)
P{lacW}l(3)j5C7j5C7
(FlyBase, 2005, BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{w+mC=lacW}l(3)j5C7j5C7
(FlyBase, 1992-)
Secondary FlyBase IDs
  • FBti0001189
hide References ( 8 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
Personal communication to FlyBase
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]