A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{PZ}slp105965 Insertion

General Information
Symbol Dmel\P{PZ}slp105965 Species D. melanogaster
Name FlyBase ID FBti0005300
Feature type transposable_element_insertion_site
Description
Inserted element P{PZ} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, slp1 Viability / fertility
Causes allele(s) Ecol\lacZslp1-05965, slp105965 Stock availability 1 publicly available
LINE ID l(2)05965
Genomic Location
Chromosomal location 2L ( 24C6 ) Sequence location 2L:3,825,636..3,825,636 [+]
Map ( GBrowse ) detailed view FBti0056422 FBti0002699 FBti0005300 FBti0050801 FBti0024914 FBti0025191
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:3,825,636..3,825,636 [+]
(FlyBase, 2005)
Orientation
Cytological location
(computed by FlyBase)
24C6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
24C8-24D1 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025644
(FlyBase, 1992-,  
hide Inserted Element
Construct P{PZ}
Location-dependent
role
lacZ enhancer trap
(Mlodzik and Hiromi, 1992)
Size 14.545Kb
Associated alleles
Ecol\lacZP\T.PZ
l(3)87Df7.2
ry+t7.2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(Sato and Tomlinson, 2007, BDGP Project Members, 1994-1999, Jackle and Janning, 1998.8.10, Vosshall, 1998.8.10, Wang et al., 2010)
slp1
(Park et al., 1996)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZslp1-05965
(BDGP Project Members, 1994-1999, Sato and Tomlinson, 2007, Jackle and Janning, 1998.8.10, Vosshall, 1998.8.10, Wang et al., 2010)
slp105965
(Park et al., 1996, BDGP Project Members, 1994-1999, Spradling et al., 1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
embryonic/larval dorsal vessel
(Park et al., 1996)
hide Detailed Description
Statement
Reference
Heart formation is completely abolished.
(Park et al., 1996)
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage  
embryonic/larval dorsal vessel  
(Jackle and Janning, 1998.8.10)
organism | segmentally repeated  
(Jackle and Janning, 1998.8.10)
embryonic/larval brain  
(Jackle and Janning, 1998.8.10)
presumptive embryonic/larval central nervous system | restricted  
(Jackle and Janning, 1998.8.10)
embryonic stage | early  
organism | striped  
(Jackle and Janning, 1998.8.10)
wandering third instar larval stage  
embryonic/larval brain  
(Meister and Braun, 1995.10)
embryonic/larval proventriculus  
(Meister and Braun, 1995.10)
adult stage  
lamina  
(Vosshall, 1998.8.10)
ocellus  
(Vosshall, 1998.8.10)
Additional Information
Statement
Reference
In early embryo, expressed in 14-15 stripes; stripe anterior to cephalic furrow.
(Jackle and Janning, 1998.8.10)
In wandering third instar larva, low levels of β-gal expression in the larval brain and proventriculus.
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
slp1
(Meister and Braun, 1995.10)
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(2)05965
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
11463
P{PZ}slp105965 cn1/CyO; ry506
hide Linkouts
hide Comments
Location 2L:3825635-3825636 determined by FlyBase alignment of dbGSS accession AQ025644 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P1463
(Meister and Braun, 1995.10)
P{PZ}l(2)0596505965
(FlyBase, 1992-)
P{PZ}slp105965
(FlyBase, 2005, Park et al., 1996, FlyBase, 1992-, Wang et al., 2010)
P{ry+t7.2=PZ}slp105965
(FlyBase, 1992-)
slp1-lacZ
(Sato and Tomlinson, 2007)
Secondary FlyBase IDs
  • FBti0000736
hide References ( 13 )
Research paper
Wang et al., 2010, PLoS ONE 5(7): e11498
NELF Potentiates Gene Transcription in the Drosophila Embryo. [FBrf0211281]
Sato and Tomlinson, 2007, Development 134(4): 659--667
Dorsal-ventral midline signaling in the developing Drosophila eye. [FBrf0195057]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Park et al., 1996, Dev. Biol. 177(1): 104--116
The wingless signaling pathway is directly involved in Drosophila heart development. [FBrf0089772]
Mlodzik and Hiromi, 1992, Conn, 1992: 397--414
Enhancer trap method in Drosophila: its application to neurobiology. [FBrf0066714]
Personal communication to FlyBase
Jackle and Janning, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103143]
Vosshall, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103142]
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]