A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{PZ}Nup21410444 Insertion

General Information
Symbol Dmel\P{PZ}Nup21410444 Species D. melanogaster
Name FlyBase ID FBti0005348
Feature type transposable_element_insertion_site
Description
Inserted element P{PZ} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, Nup214 Viability / fertility
Causes allele(s) Ecol\lacZNup214-10444, Nup21410444 Stock availability 1 publicly available
LINE ID l(2)10444
Genomic Location
Chromosomal location 2R ( 59B6 ) Sequence location 2R:18,812,056..18,812,056 [+]
Map ( GBrowse ) detailed view FBti0005348 FBti0025710 FBti0125379_1 FBti0125379_2 FBti0021936 FBti0053049 FBti0010771 FBti0048738 FBti0111628 FBti0028146 FBti0050496 FBti0143990 FBti0051863 FBti0068104 FBti0114047 FBti0051105 FBti0047555 FBti0054614 FBti0038856 FBti0007771 FBti0036419 FBti0072738 FBti0070556 FBti0054782
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:18,812,056..18,812,056 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
59B6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
59B6-59B7 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025675
(FlyBase, 1992-,  
hide Inserted Element
Construct P{PZ}
Location-dependent
role
lacZ enhancer trap
(Mlodzik and Hiromi, 1992)
Size 14.545Kb
Associated alleles
Ecol\lacZP\T.PZ
l(3)87Df7.2
ry+t7.2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(Csink et al., 2002, BDGP Project Members, 1994-1999, Martin et al., 2001, Vosshall, 1998.8.10)
Nup214
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZNup214-10444
(Csink et al., 2002, BDGP Project Members, 1994-1999, Martin et al., 2001, Vosshall, 1998.8.10)
Nup21410444
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage  
imaginal disc  
(Meister and Braun, 1995.10)
adult stage  
adult brain | restricted  
(Vosshall, 1998.8.10)
adult central complex | restricted  
(Vosshall, 1998.8.10)
Additional Information
Statement
Reference
In the adult, expressed in a discrete region of the central brain.
(Vosshall, 1998.8.10)
In wandering third instar larva, expression in imaginal discs (which discs not specified).
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(2)10444
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12369
P{PZ}Nup21410444 cn1/CyO; ry506
hide Linkouts
hide Comments
Location 2R:18432133-18432134 confirmed by FlyBase alignment of dbGSS accession AQ025675 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
10444
(Csink et al., 2002)
P2369
(Meister and Braun, 1995.10)
P{PZ}l(2)1044410444
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{PZ}Nup21410444
(FlyBase, 2005, FlyBase, 1992-)
P{ry+t7.2=PZ}l(2)1044410444
(Martin et al., 2001, FlyBase, 1992-)
Secondary FlyBase IDs
  • FBti0000434
hide References ( 11 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Csink et al., 2002, Genetics 160(1): 257--269
Differential gene silencing by trans-heterochromatin in Drosophila melanogaster. [FBrf0144893]
Martin et al., 2001, J. comp. Physiol. A. 187(5): 359--370
Mutations affecting the cAMP transduction pathway modify olfaction in Drosophila. [FBrf0138454]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Mlodzik and Hiromi, 1992, Conn, 1992: 397--414
Enhancer trap method in Drosophila: its application to neurobiology. [FBrf0066714]
Personal communication to FlyBase
Vosshall, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103142]
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]