A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{PZ}stv00543 Insertion

General Information
Symbol Dmel\P{PZ}stv00543 Species D. melanogaster
Name FlyBase ID FBti0005405
Feature type transposable_element_insertion_site
Description
Inserted element P{PZ} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, stv Viability / fertility
Causes allele(s) Ecol\lacZstv-00543, stv00543 Stock availability 1 publicly available
LINE ID l(3)00543
Genomic Location
Chromosomal location 3L ( 70B2 ) Sequence location 3L:13,473,394..13,473,394 [+]
Map ( GBrowse ) detailed view FBti0039209 FBti0057383 FBti0053966 FBti0070197 FBti0011714 FBti0068712 FBti0055277 FBti0069193 FBti0069023 FBti0045917 FBti0143748 FBti0044756 FBti0065524 FBti0066441 FBti0005405 FBti0125676 FBti0046781 FBti0074702 FBti0042416 FBti0034846 FBti0075013 FBti0107922 FBti0041535 FBti0043750
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:13,473,394..13,473,394 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
70B2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
70B1-70B3 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ026158
(FlyBase, 1992-,  
hide Inserted Element
Construct P{PZ}
Location-dependent
role
lacZ enhancer trap
(Mlodzik and Hiromi, 1992)
Size 14.545Kb
Associated alleles
Ecol\lacZP\T.PZ
l(3)87Df7.2
ry+t7.2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10)
stv
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZstv-00543
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10)
stv00543
(BDGP Project Members, 1994-1999, Coulson et al., 2005, Spradling et al., 1999)
Lethality
References
lethal | recessive
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
semi-lethal | recessive
(Coulson et al., 2005, Bloomington Drosophila Stock Center, 2000.11.30)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
In wandering third instar larva, no detectable β-gal staining.
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)00543
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
11501
P{PZ}stv00543 ry506/TM3, ryRK Sb1 Ser1
hide Linkouts
hide Comments
Location 3L:13454241-13454242 confirmed by FlyBase alignment of dbGSS accession AQ026158 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P1501
(Meister and Braun, 1995.10)
P{PZ}l(3)0054300543
(FlyBase, 1992-, FlyBase, 2005, BDGP Project Members, 1994-1999)
P{PZ}stv00543
(FlyBase, 1992-)
P{ry+t7.2=PZ}l(3)0054300543
(FlyBase, 1992-)
Secondary FlyBase IDs
  • FBti0000469
hide References ( 11 )
Research paper
Coulson et al., 2005, Genetics 171(4): 1799--1812
Drosophila starvin encodes a tissue-specific BAG-domain protein required for larval food uptake. [FBrf0190713]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Mlodzik and Hiromi, 1992, Conn, 1992: 397--414
Enhancer trap method in Drosophila: its application to neurobiology. [FBrf0066714]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2000.11.30, l(3)00543<up>00543</up>.
l(3)0054300543. [FBrf0132172]
Vosshall, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103142]
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]