A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{PZ}rdx03477 Insertion

General Information
Symbol Dmel\P{PZ}rdx03477 Species D. melanogaster
Name FlyBase ID FBti0005477
Feature type transposable_element_insertion_site
Description
Inserted element P{PZ} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, rdx Viability / fertility
Causes allele(s) Ecol\lacZrdx-03477, rdx03477 Stock availability 2 publicly available
LINE ID l(3)03477
Genomic Location
Chromosomal location 3R ( 88A4 ) Sequence location 3R:9,809,632..9,809,632 [+]
Map ( GBrowse ) detailed view FBti0019371 FBti0043267 FBti0056613 FBti0106003 FBti0103313 FBti0075841 FBti0112101 FBti0055846 FBti0108813 FBti0033682 FBti0102288 FBti0037073 FBti0054441 FBti0056473 FBti0029226 FBti0040253 FBti0005477 FBti0027922 FBti0036258 FBti0035000 FBti0070806
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:9,809,632..9,809,632 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
88A4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ034055
(FlyBase, 1992-,  
hide Inserted Element
Construct P{PZ}
Location-dependent
role
lacZ enhancer trap
(Mlodzik and Hiromi, 1992)
Size 14.545Kb
Associated alleles
Ecol\lacZP\T.PZ
l(3)87Df7.2
ry+t7.2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10, Seong et al., 2010, Zhang et al., 2006)
rdx
(BDGP Project Members, 1994-1999, Seong et al., 2010, Zhang et al., 2006)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZrdx-03477
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10, Seong et al., 2010, Zhang et al., 2006)
rdx03477
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Sekelsky et al., 1999, Seong et al., 2010, Zhang et al., 2006)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage  
imaginal disc  
(Meister and Braun, 1995.10)
Additional Information
Statement
Reference
In third instar larva, expression in imaginal discs (which discs not specified).
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)03477
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
11592
cn1; ry506 P{PZ}rdx03477 rdx1/TM3, ryRK Sb1 Ser1
Kyoto
108873
cn1; ry506 P{PZ}rdx03477/TM3, ryRK Sb1 Ser1
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hide Comments
Location 3R:9809632-9809633 confirmed by FlyBase alignment of dbGSS accession AQ034055 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
hib-lacZ
(Zhang et al., 2006)
hibZ
(Zhang et al., 2006)
l(3)03477
(Zhang et al., 2006)
P1592
(Meister and Braun, 1995.10)
P{PZ}l(3)88Aa03477
(FlyBase, 1992-)
P{PZ}l(3)0347703477
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{PZ}mei-P1903477
(FlyBase, 2005, FlyBase, 1992-, Seong et al., 2010, )
P{PZ}rdx03477
 
P{ry+t7.2=PZ}l(3)0347703477
(FlyBase, 1992-)
rdx-lacZ
(Seong et al., 2010)
Secondary FlyBase IDs
  • FBti0000533
hide References ( 12 )
Research paper
Seong et al., 2010, PLoS ONE 5(12): e15365
Inhibition of the nuclear import of cubitus interruptus by roadkill in the presence of strong hedgehog signal. [FBrf0212658]
Zhang et al., 2006, Dev. Cell 10(6): 719--729
A hedgehog-induced BTB protein modulates hedgehog signaling by degrading Ci/Gli transcription factor. [FBrf0194555]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Sekelsky et al., 1999, Genetics 152(2): 529--542
Identification of novel Drosophila meiotic genes recovered in a P-element screen. [FBrf0109059]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Mlodzik and Hiromi, 1992, Conn, 1992: 397--414
Enhancer trap method in Drosophila: its application to neurobiology. [FBrf0066714]
Personal communication to FlyBase
Vosshall, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103142]
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]