A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{PZ}Tbp-104210b Insertion

General Information
Symbol Dmel\P{PZ}Tbp-104210b Species D. melanogaster
Name FlyBase ID FBti0005505
Feature type transposable_element_insertion_site
Description
Inserted element P{PZ} Expression data lacZ reporter
Affected gene(s) Ecol\lacZ, Tbp-1 Viability / fertility
Causes allele(s) Ecol\lacZTbp-1-04210b, Tbp-104210b Stock availability 1 publicly available
LINE ID l(3)04210
Genomic Location
Chromosomal location 3R ( 95B1 ) Sequence location 3R:19,578,663..19,578,663 [+]
Map ( GBrowse ) detailed view FBti0047941 FBti0056063 FBti0108351 FBti0099960 FBti0100949 FBti0024733 FBti0040121 FBti0005505 FBti0077962 FBti0065083 FBti0005515 FBti0028332 FBti0143549 FBti0044075 FBti0044102 FBti0103996 FBti0025151 FBti0126234_1 FBti0126234_2 FBti0042183
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:19,578,663..19,578,663 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
95B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
95B1--95B2 (in situ hybridization reported)
(Misra, 2000.8.11)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ026194
(FlyBase, 1992-,  
hide Inserted Element
Construct P{PZ}
Location-dependent
role
lacZ enhancer trap
(Mlodzik and Hiromi, 1992)
Size 14.545Kb
Associated alleles
Ecol\lacZP\T.PZ
l(3)87Df7.2
ry+t7.2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10)
Tbp-1
(Misra, 2000.8.11)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZTbp-1-04210b
(BDGP Project Members, 1994-1999, Vosshall, 1998.8.10)
Tbp-104210b
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Misra, 2000.8.11, Beaton, 2000.1.31)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999, Beaton, 2000.1.31)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage  
imaginal disc  
(Meister and Braun, 1995.10)
Additional Information
Statement
Reference
In wandering third instar larva, expression in imaginal discs (which discs not specified).
(Meister and Braun, 1995.10)
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)04210
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
11625
ry506 P{PZ}04210a P{PZ}Tbp-104210b/TM3, ryRK Sb1 Ser1
hide Linkouts
hide Comments
Location 3R:19578663-19578664 confirmed by FlyBase alignment of dbGSS accession AQ026194 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
Isolated from multiple insertion line.
(Misra, 2000.8.11)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P1625
(Meister and Braun, 1995.10)
P{PZ}l(3)0421004210
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{PZ}Pros26S-RS6A04210
(FlyBase, 1992-)
P{PZ}Tbp-104210b
(FlyBase, 2005, BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{ry+t7.2=PZ}l(3)0421004210
(FlyBase, 1992-)
Secondary FlyBase IDs
  • FBti0000560
hide References ( 11 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Mlodzik and Hiromi, 1992, Conn, 1992: 397--414
Enhancer trap method in Drosophila: its application to neurobiology. [FBrf0066714]
Personal communication to FlyBase
Beaton, 2000.1.31, BDGP P element Update.
BDGP P element Update. [FBrf0126832]
Misra, 2000.8.11, Current list of possibly CG-able known genes.
Current list of possibly CG-able known genes. [FBrf0131046]
Vosshall, 1998.8.10, Patterns of lacZ expression.
Patterns of lacZ expression. [FBrf0103142]
Meister and Braun, 1995.10, lacZ expression patterns for P{} insertions at Bloomington.
lacZ expression patterns for P{} insertions at Bloomington. [FBrf0083714]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]