FlyBase Insertion Report: Dmel\P{PZ}HDAC1[04556]

General Information

Symbol

Dmel\P{PZ}HDAC1⁰⁴⁵⁵⁶

Species

D. melanogaster

Name

FlyBase ID

FBti0005513

Feature type

transposable_element_insertion_site

Also Known As

P{PZ}Rpd3⁰⁴⁵⁵⁶

Description

Inserted Element

P{PZ}

LINE ID

l(3)04556

Affected gene(s)

Ecol\lacZ, HDAC1

Viability / fertility

Associated allele(s)

Ecol\lacZ^HDAC1-04556, HDAC1⁰⁴⁵⁵⁶

Stock availability

1 publicly available

Genomic Location

Chromosomal Location

3L ( 64B12 )

Sequence Location

3L:4,626,763..4,626,763 [+]

Target / Docking site

Genomic Maps

JBrowse

Member of Large Scale Dataset(s)

Dataset

TI_set_P{PZ}.BDGP

Description

Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection.

(Bellen et al., 2004)

A set of mutant stocks derived by insertional mutagenesis using the P-element construct P{PZ}; most lines have a lethal or sterile phenotype. The P{PZ} construct carries a ry[+] visible marker, Ecol\lacZ enhancer trap sequences, and bacterial sequences that allow plasmid rescue.

(Spradling et al., 1999)

Detailed Mapping Data

Chromosome (arm)

Sequence Location

3L:4,626,763..4,626,763 [+]

(Mannervik and Levine, 1999)

Orientation

Cytological location (computed by FlyBase)

64B12 (inferred by FlyBase from sequence location)

Cytological location (reported)

64C1-64C2 (in situ hybridization reported)

(BDGP Project Members, 1994-1999)

Insertion into Natural transposon

Comments concerning location

Genomic location previously reported as 3L:4626758..4626758 .

Sequence Data

Flanking sequence

G00703

(FlyBase, 1992-)

Inserted Element

Construct

P{PZ}

Size (Kb)

14.545

Component Allele(s)

l(3)87Df^7.2

ry^+t7.2

Molecular map

Affected Gene(s)

Insertion may affect gene

Ecol\lacZ

(McClure and Schubiger, 2008, Russell et al., 1998, Vosshall, 1998.8.10, BDGP Project Members, 1994-1999)

HDAC1

(Lenz et al., 2021, Kopp et al., 2015, Joyce et al., 2011, Branco et al., 2008, Chen et al., 2008, McClure and Schubiger, 2008, BDGP Project Members, 1994-1999)

Variant Molecular Consequences

Phenotypic Data

Associated Allele

Phenotypic Data

Ecol\lacZ^HDAC1-04556

Phenotypic Class Phenotype Manifest in Detailed Description

HDAC1⁰⁴⁵⁵⁶

Phenotypic Class Phenotype Manifest in Detailed Description

Expression Data

Reporter Expression

distribution deduced from reporter

Stage

Tissue/Position (including subcellular localization)

Reference

wandering third instar larval stage

imaginal disc

(Meister and Braun, 1995.10)

Additional Information

Statement

Reference

In third instar larva, expression in imaginal discs (which discs not specified).

(Meister and Braun, 1995.10)

Marker for

Reflects expression of

Reporter construct used in assay

Data on Genetic Line

Line ID

l(3)04556

(Gene Disruption Project members, 2001-)

Origin as a multiple insertion line

Progenitor(s) within the Genome

Related Aberration or Balancer

Aberration

Balancer

Stocks (1)

Bloomington

11633

P{PZ}HDAC1⁰⁴⁵⁵⁶ ry⁵⁰⁶/TM3, ry^RK Sb¹ Ser¹

External Crossreferences and Linkouts ( 0 )

Comments

P{PZ}Rpd3⁰⁴⁵⁵⁶ is inserted at nucleotide 47 in the 223bp long 5' UTR of Rpd3.

(Mannervik and Levine, 1999)

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

P{PZ}HDAC1⁰⁴⁵⁵⁶

P{PZ}Rpd3⁰⁴⁵⁵⁶

(Chen et al., 2008, Mannervik and Levine, 1999, FlyBase, 1992-)

P{PZ}l(3)04556⁰⁴⁵⁵⁶

(BDGP Project Members, 1994-1999, FlyBase, 1992-)

P{PZ}rpd3⁰⁴⁵⁵⁶

(Kopp et al., 2015)

P{ry^+t7.2=PZ}l(3)04556⁰⁴⁵⁵⁶

(FlyBase, 1992-)

Rpd3⁰⁴⁵⁵⁶

(Joyce et al., 2011)

Name Synonyms

Secondary FlyBase IDs

FBti0000567

References (40)

Report Sections

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