A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}exk12913 Insertion

General Information
Symbol Dmel\P{lacW}exk12913 Species D. melanogaster
Name FlyBase ID FBti0006456
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) Ecol\lacZ, ex Viability / fertility
Causes allele(s) Ecol\lacZex-k12913, exk12913 Stock availability 3 publicly available
LINE ID l(2)k12913
Genomic Location
Chromosomal location 2L ( 21C2 ) Sequence location 2L:431,832..431,832 [-]
Map ( GBrowse ) detailed view FBti0048755 FBti0006736 FBti0124481_2 FBti0124481_1 FBti0108082 FBti0006698 FBti0105453 FBti0039990 FBti0056324 FBti0011123 FBti0010709 FBti0006717 FBti0105392 FBti0109251 FBti0104411 FBti0105564 FBti0033564 FBti0003139 FBti0026291 FBti0006456 FBti0005182 FBti0013428 FBti0103510
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:431,832..431,832 [-]
Orientation
Cytological location
(computed by FlyBase)
21C2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
21C3-21C4 (in situ hybridization reported)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
Size 10.691Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
viable
Sterility
References
hide Phenotype Manifest In
spermatogonial cyst | cell non-autonomous | somatic clone
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Statement
Reference
ex[k12913] homozygous mutant clones generated in the male germline develop normally. 16 cells are observed per cyst, and cell size and morphology are indistinguishable from neighbouring control cells. However, non-autonomous germline over-proliferation is observed in non-mutant spermatogonial cysts.
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
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hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 3 )
Bloomington
Kyoto
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Location 2L:431831-431832 determined by FlyBase alignment of dbGSS accession AQ026045 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
This insertion was listed in the BDGP database as a lethal or sterile line during the period 1994-1999, but was not verified as such prior to the summary publication (FBrf0111489). Reasons for excluding lines from the collection described in FBrf0111489 include presence of more than one P insertion on the mutant chromosome, separation of lethality (or sterility) from the location of the insertion, and loss of lethality (or sterility) from the stock. Further information is available from http://www.fruitfly.org/bfd/ and from Dr. Allan Spradling (spradling@mail1.ciwemb.edu).
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}exk12193
P{lacW}l(2)k12913k12913
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Sun et al., 2008, Dev. Dyn. 237(1): 270--275
Genes of Hippo signaling network act unconventionally in the control of germline proliferation in Drosophila. [FBrf0200427]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
Supplementary material
Lee et al., 2008, Curr. Biol. 18(24):
Supplemental Data. [FBrf0207609]
Parks et al., 2004, Nature Genetics 36(3):
Supplementary Table 1: Deletions generated at Bloomington between trans-heterozygous P element insertions. [FBrf0179070]
Personal communication to FlyBase
Deal and Cook, 2002.7.14, Isolation and characterization of Df(2L)BSC16.
Isolation and characterization of Df(2L)BSC16. [FBrf0150855]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]