A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}me31Bk06607 Insertion

General Information
Symbol Dmel\P{lacW}me31Bk06607 Species D. melanogaster
Name FlyBase ID FBti0006734
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) Ecol\lacZ, me31B Viability / fertility
Causes allele(s) Ecol\lacZme31B-k06607, me31Bk06607 Stock availability 2 publicly available
LINE ID l(2)k06607
Genomic Location
Chromosomal location 2L ( 31B1 ) Sequence location 2L:10,239,309..10,239,309 [+]
Map ( GBrowse ) detailed view FBti0029477 FBti0026104 FBti0112739 FBti0109882 FBti0074812 FBti0044246 FBti0111488 FBti0024797 FBti0124701 FBti0104637 FBti0076140 FBti0044974 FBti0006734 FBti0109965 FBti0052876 FBti0143579 FBti0099919 FBti0048067 FBti0110847 FBti0030033 FBti0023295 FBti0066855
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:10,239,309..10,239,309 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
31B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
31B1-31B2 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025801
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ecol\lacZ
(BDGP Project Members, 1994-1999)
me31B
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZme31B-k06607
(BDGP Project Members, 1994-1999)
me31Bk06607
(BDGP Project Members, 1994-1999, Nakamura et al., 2001, Spradling et al., 1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
viable
(Nakamura et al., 2001)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(2)k06607
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
10635
y1 w67c23; P{lacW}me31Bk06607/CyO
Kyoto
111201
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{lacW}me31Bk06607 P{neoFRT}40A/CyO y+
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hide Comments
Location 2L:10239309-10239310 confirmed by FlyBase alignment of dbGSS accession AQ025801 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
Separable from a lethal mutation on the chromosome.
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}l(2)k06607k06607
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
P{lacW}me31Bk06607
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Fluegel et al., 2006, Genetics 172(1): 185--196
Mutations of a Drosophila NPC1 gene confer sterol and ecdysone metabolic defects. [FBrf0190720]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Nakamura et al., 2001, Development 128(17): 3233--3242
Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis. [FBrf0138368]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]