A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}l(2)k06409k06409 Insertion

General Information
Symbol Dmel\P{lacW}l(2)k06409k06409 Species D. melanogaster
Name FlyBase ID FBti0006741
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) CG13438, Ecol\lacZ, l(2)k06409 Viability / fertility
Causes allele(s) Ecol\lacZk06409, l(2)k06409k06409 Stock availability 2 publicly available
LINE ID l(2)k06409
Genomic Location
Chromosomal location 2R ( 57B1 ) Sequence location 2R:16,585,899..16,585,899 [+]
Map ( GBrowse ) detailed view FBti0125329 FBti0132712 FBti0059363 FBti0058895 FBti0035309 FBti0068736 FBti0070465 FBti0059191 FBti0102834 FBti0110479 FBti0102785 FBti0006718 FBti0103594 FBti0077935 FBti0103010 FBti0028557 FBti0006741 FBti0025954 FBti0056522 FBti0103502 FBti0005170 FBti0035352 FBti0030168 FBti0070733 FBti0033736 FBti0069131 FBti0037440 FBti0029081 FBti0105905 FBti0103954 FBti0109799 FBti0109797 FBti0109223 FBti0107962
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:16,585,899..16,585,899 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
57B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
57B1-57B3 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025794
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG13438
(Misra, 2000.8.25)
Ecol\lacZ
(BDGP Project Members, 1994-1999)
l(2)k06409
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Ecol\lacZk06409
(BDGP Project Members, 1994-1999)
l(2)k06409k06409
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Misra, 2000.8.25)
Lethality
References
lethal | recessive
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(2)k06409
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
10624
y1 w67c23; P{lacW}l(2)k06409k06409/CyO
Kyoto
111195
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{neoFRT}42D P{lacW}l(2)k06409k06409 /CyO y+
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Location 2R:16213257-16213258 confirmed by FlyBase alignment of dbGSS accession AQ025794 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b.
(FlyBase, 2005)
The P{lacW}l(2)k06409k06409 insertion maps 4783bp downstream of the 3\' end of the CT32796 transcript of CG13438.
(Misra, 2000.8.25)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}l(2)k06409k06409
(FlyBase, 2005, BDGP Project Members, 1994-1999, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
Personal communication to FlyBase
Misra, 2000.8.25, nc5 report, second installment.
nc5 report, second installment. [FBrf0131112]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]