A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}α-Man-IEP556 Insertion

General Information
Symbol Dmel\P{EP}α-Man-IEP556 Species D. melanogaster
Name FlyBase ID FBti0007323
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) α-Man-I Viability / fertility viable
Causes allele(s) α-Man-IEP556 Stock availability 1 publicly available
LINE ID EP(X)0556
Genomic Location
Chromosomal location X ( 9B6 ) Sequence location X:10,184,225..10,184,225 [-]
Map ( GBrowse ) detailed view FBti0072008 FBti0071762 FBti0036358 FBti0130240 FBti0130241 FBti0109440 FBti0034949 FBti0130242 FBti0030361 FBti0039743 FBti0109065 FBti0020934 FBti0069956 FBti0007526 FBti0007539 FBti0007323 FBti0109072 FBti0071623 FBti0029812 FBti0048528
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:10,184,225..10,184,225 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
9B6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
9B7-9B8 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
9B7-9B8 (in situ hybridization reported)
(Spradling, 1997.8.22)
9B11-9B11 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025350
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
α-Man-I
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
α-Man-IEP556
(Gene Disruption Project members, 2001-)
Lethality
References
viable
(Spradling, 1997.8.22)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)0556
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
10103
w1118 P{EP}α-Man-IEP556
hide Linkouts
hide Comments
Location X:10135413-10135414 confirmed by FlyBase alignment of dbGSS accession AQ025350 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
ep(x)0556
(FlyBase, 1992-)
EP(X)0556
(FlyBase, 1992-)
P{EP}CG18799EP556
(FlyBase, 1992-)
P{EP}EP556
(FlyBase, 1992-)
P{EP}α-Man-IEP556
(FlyBase, 2005, FlyBase, 1992-)
P{w}EP556
(Spradling, 1997.8.22)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Marcus, 2003, Genetics 163(2): 591--597
Female site-specific transposase-induced recombination: a high-efficiency method for fine mapping mutations on the X chromosome in Drosophila. [FBrf0157240]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Spradling, 1997.8.22, EP lines from BDGP.
EP lines from BDGP. [FBrf0100829]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]