A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}fs(1)hEP1033 Insertion

General Information
Symbol Dmel\P{EP}fs(1)hEP1033 Species D. melanogaster
Name FlyBase ID FBti0007355
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) fs(1)h, mys Viability / fertility viable
Causes allele(s) fs(1)hEP1033, mysEP1033 Stock availability none publicly available
LINE ID EP(X)1033
Genomic Location
Chromosomal location X ( 7D5 ) Sequence location X:7,955,189..7,955,189 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0015686 FBti0071576 FBti0108626 FBti0037232 FBti0108187 FBti0066320 FBti0034587 FBti0035681 FBti0028105 FBti0077091 FBti0049152 FBti0024538 FBti0058872 FBti0071855 FBti0036824 FBti0034180 FBti0111161 FBti0033864 FBti0038083 FBti0055479 FBti0055292 FBti0077090 FBti0034119 FBti0007313 FBti0007355 FBti0040123 FBti0054224 FBti0018655 FBti0013939
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Rorth, 1996, Bellen et al., 2004)
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:7,955,189..7,955,189 [+]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
7D5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
7D5-7D7 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
7D5-7D7 (in situ hybridization reported)
(Spradling, 1997.8.22)
7D6-7D6 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025375
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
fs(1)h
(BDGP Project Members, 2000-)
mys
(Buff et al., 2007)
hide Alleles and Phenotypes
Causes alleles
fs(1)hEP1033
(Gene Disruption Project members, 2001-)
mysEP1033
(Buff et al., 2007)
Lethality
References
viable
(Spradling, 1997.8.22)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)1033
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Location X:7906392-7906393 confirmed by FlyBase alignment of dbGSS accession AQ025375 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
ep(x)1033
(FlyBase, 1992-)
EP(X)1033
(FlyBase, 1992-, Buff et al., 2007)
P{EP}EP1033
(FlyBase, 1992-)
P{EP}fs(1)hEP1033
(FlyBase, 2005, FlyBase, 1992-, )
P{w}EP1033
(Spradling, 1997.8.22)
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Florence and Faller, 2008, Dev. Dyn. 237(3): 554--564
Drosophila female sterile (1) homeotic is a multifunctional transcriptional regulator that is modulated by Ras signaling. [FBrf0205317]
Buff et al., 2007, Genetics 176(1): 209--220
Genetic modifiers of Drosophila palmitoyl-protein thioesterase 1-induced degeneration. [FBrf0201672]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
Spradling, 1997.8.22, EP lines from BDGP.
EP lines from BDGP. [FBrf0100829]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]