A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}ActnEP1193 Insertion

General Information
Symbol Dmel\P{EP}ActnEP1193 Species D. melanogaster
Name FlyBase ID FBti0007384
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) Actn, usp Viability / fertility
Causes allele(s) ActnEP1193 Stock availability 1 publicly available
LINE ID EP(X)1193
Genomic Location
Chromosomal location X ( 2C7 ) Sequence location X:1,935,970..1,935,970 [-]
Map ( GBrowse ) detailed view FBti0018242 FBti0056593 FBti0033667 FBti0075853 FBti0012876 FBti0099714 FBti0057940 FBti0131883 FBti0037354 FBti0039836 FBti0071296 FBti0007384 FBti0037230 FBti0029710 FBti0023555 FBti0029347 FBti0048814 FBti0029352 FBti0048211 FBti0052570 FBti0070115 FBti0011935 FBti0056333 FBti0007542 FBti0054603 FBti0108518 FBti0021919 FBti0068632
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
1
(BDGP Project Members, 1994-1999)
Sequence Location
X:1,935,970..1,935,970 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
2C7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
2C3-2C3 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
2C7-2C8 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025401
(Benos et al., 2001, FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Actn
(BDGP Project Members, 2000-)
usp
(Benos et al., 2001)
hide Alleles and Phenotypes
Causes alleles
ActnEP1193
(Gene Disruption Project members, 2001-)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)1193
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
10894
P{EP}ActnEP1193 w1118
hide Linkouts
hide Comments
Location X:1898093-1898094 confirmed by FlyBase alignment of dbGSS accession AQ025401 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
Maps to clone: 22E5
(Benos et al., 2001)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(1)1193
(Benos et al., 2001)
ep(x)1193
(FlyBase, 1992-)
EP(X)1193
(FlyBase, 1992-)
P{EP}ActnEP1193
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP1193
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Marcus, 2003, Genetics 163(2): 591--597
Female site-specific transposase-induced recombination: a high-efficiency method for fine mapping mutations on the X chromosome in Drosophila. [FBrf0157240]
Benos et al., 2001, Genome Res. 11(5): 710--730
From First Base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. [FBrf0135823]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]