A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}CG44325EP1407 Insertion

General Information
Symbol Dmel\P{EP}CG44325EP1407 Species D. melanogaster
Name FlyBase ID FBti0007429
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG7246, CG44325 Viability / fertility
Causes allele(s) CG44325EP1407 Stock availability 1 publicly available
LINE ID EP(X)1407
Genomic Location
Chromosomal location X ( 8C4 ) Sequence location X:8,972,515..8,972,515 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0139967 FBti0042657 FBti0007429 FBti0007353 FBti0039959 FBti0069482 FBti0054791 FBti0067178 FBti0132280 FBti0100088 FBti0131909 FBti0132371 FBti0065183
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Rorth, 1996, Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
1
(BDGP Project Members, 1994-1999)
Sequence Location
X:8,972,515..8,972,515 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
8C4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
8C4-8C5 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
8C12-8C12 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025444
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG7246
(BDGP Project Members, 2000-)
CG44325
(FlyBase, 1996-)
hide Alleles and Phenotypes
Causes alleles
CG44325EP1407
(FlyBase, 1996-)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)1407
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Kyoto
122042
w1118 P{EP}CG44325EP1407
hide Linkouts
hide Comments
Location X:8923703-8923704 confirmed by FlyBase alignment of dbGSS accession AQ025444 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
ep(x)1407
(FlyBase, 1992-)
EP(X)1407
(FlyBase, 1992-)
P{EP}CG7267EP1407
(FlyBase, 1992-, FlyBase, 2005)
P{EP}CG44325EP1407
 
P{EP}EP1407
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]