A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG2924EP1596 Insertion

General Information
Symbol Dmel\P{EP}CG2924EP1596 Species D. melanogaster
Name FlyBase ID FBti0007512
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG2924 Viability / fertility
Causes allele(s) CG2924EP1596 Stock availability 1 publicly available
LINE ID EP(X)1596
Genomic Location
Chromosomal location X ( 2F3 ) Sequence location X:2,162,135..2,162,135 [+]
Map ( GBrowse ) detailed view FBti0071541 FBti0013199 FBti0132297 FBti0007512 FBti0027601 FBti0071272 FBti0074639 FBti0075157 FBti0036329 FBti0077807 FBti0107710
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
1
(BDGP Project Members, 1994-1999)
Sequence Location
X:2,162,135..2,162,135 [+]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
2F3 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
2F1-2F1 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
2F1-2F2 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025525
(Benos et al., 2001, FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG2924
(BDGP Project Members, 2000-, Cao et al., 2008)
hide Alleles and Phenotypes
Causes alleles
CG2924EP1596
(Benos et al., 2001, Gene Disruption Project members, 2001-, Cao et al., 2008)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Expression using Scer\GAL4[ey.PU] does not induce a rough eye phenotype.
(Cao et al., 2008)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)1596
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17012
P{EP}CG2924EP1596 w1118
hide Linkouts
hide Comments
Location X:2124258-2124259 confirmed by FlyBase alignment of dbGSS accession AQ025525 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
Maps to clone: 25E8
(Benos et al., 2001)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
CG2924EP(X)1596
(Cao et al., 2008)
EP(1)1596
(Benos et al., 2001)
ep(x)1596
(FlyBase, 1992-)
EP(X)1596
(FlyBase, 1992-, Cao et al., 2008)
P{EP}CG2924EP1596
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EG:25E8.2EP1596
(FlyBase, 1992-)
P{EP}EP1596
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Cao et al., 2008, Genetics 178(3): 1457--1471
Identification of novel genes that modify phenotypes induced by Alzheimer's beta-amyloid overexpression in Drosophila. [FBrf0205107]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Benos et al., 2001, Genome Res. 11(5): 710--730
From First Base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. [FBrf0135823]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]