A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}grpEP921 Insertion

General Information
Symbol Dmel\P{EP}grpEP921 Species D. melanogaster
Name FlyBase ID FBti0007727
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) grp, squ Viability / fertility
Causes allele(s) grpEP921, squEP921 Stock availability none publicly available
LINE ID EP(2)0921
Genomic Location
Chromosomal location 2L ( 36A10 ) Sequence location 2L:16,680,751..16,680,751 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0060535 FBti0061379 FBti0113560 FBti0042214 FBti0106072 FBti0103111 FBti0112110 FBti0024198 FBti0028594 FBti0064939 FBti0064933 FBti0108992 FBti0059377 FBti0104332 FBti0104286 FBti0035879 FBti0108880 FBti0110728 FBti0007727 FBti0041354 FBti0109808 FBti0126426 FBti0049566 FBti0068163 FBti0051184 FBti0067610 FBti0036229 FBti0045141 FBti0112591 FBti0108308 FBti0109873 FBti0100170 FBti0110606 FBti0047563 FBti0064339 FBti0108758 FBti0111422 FBti0028097 FBti0072183 FBti0028096 FBti0034290 FBti0066004 FBti0014473 FBti0076902 FBti0033575 FBti0035548 FBti0069781 FBti0034983 FBti0036507 FBti0015068 FBti0028134 FBti0069752 FBti0011242 FBti0025896 FBti0103896 FBti0106657 FBti0007768 FBti0011290 FBti0076903 FBti0036239 FBti0105807 FBti0024118 FBti0028789 FBti0036207 FBti0054984 FBti0035883 FBti0111269 FBti0102549 FBti0014471 FBti0113490 FBti0102156 FBti0011054 FBti0010929 FBti0028504 FBti0112967 FBti0112193 FBti0105138 FBti0144026 FBti0037642 FBti0107171 FBti0028182 FBti0112024 FBti0132702 FBti0108303 FBti0038238 FBti0077019 FBti0114368 FBti0011278 FBti0021087 FBti0059111 FBti0109609 FBti0109800 FBti0035115 FBti0111691 FBti0108598 FBti0057030 FBti0028371 FBti0029845 FBti0037450 FBti0110399 FBti0007634 FBti0106311 FBti0058963 FBti0108102 FBti0108103 FBti0072182 FBti0105001 FBti0109574 FBti0111780 FBti0076901 FBti0057800 FBti0006390 FBti0106914
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:16,680,751..16,680,751 [+]
Orientation
Cytological location
(computed by FlyBase)
36A10 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
36A6-36A6 (reported as inferred from sequence location)
36A10-36A11 (in situ hybridization reported)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
Size 7.987Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Location 2L:16676680-16676681 confirmed by FlyBase alignment of dbGSS accession AQ024988 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
insertion of mobile activating element
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
ep(2)0921
EP(2)0921
P{EP}EP921
P{EP}grpEP921
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]