A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG8219EP3072 Insertion

General Information
Symbol Dmel\P{EP}CG8219EP3072 Species D. melanogaster
Name FlyBase ID FBti0007991
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG8219 Viability / fertility
Causes allele(s) CG8219EP3072 Stock availability 1 publicly available
LINE ID EP(3)3072
Genomic Location
Chromosomal location 3L ( 65A8 ) Sequence location 3L:6,194,375..6,194,375 [-]
Map ( GBrowse ) detailed view FBti0005445 FBti0107328 FBti0111025 FBti0011586 FBti0074667 FBti0110975 FBti0034660 FBti0107140 FBti0035925 FBti0053340 FBti0143300 FBti0007991 FBti0075471 FBti0052650 FBti0143056
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
3
(BDGP Project Members, 1994-1999)
Sequence Location
3L:6,194,375..6,194,375 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
65A8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
65A6-65A6 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ254698
(FlyBase, 1992-)
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG8219
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
CG8219EP3072
(Gene Disruption Project members, 2001-, Pena-Rangel et al., 2002)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
pnrMD237/+ adults expressing CG8219EP3072 under the control of Scer\GAL4pnr-MD237 show loss of a row of microchaetae in the dorsal midline.
(Pena-Rangel et al., 2002)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(3)3072
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17259
w1118; P{EP}CG8219EP3072
hide Linkouts
hide Comments
Location 3L:6175222-6175223 confirmed by FlyBase alignment of dbGSS accession AQ254698 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
ep(3)3072
(FlyBase, 1992-)
P{EP}CG8219EP3072
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP3072
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050
A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]