A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{lacW}Dhods3512 Insertion

General Information
Symbol Dmel\P{lacW}Dhods3512 Species D. melanogaster
Name FlyBase ID FBti0009967
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) Dhod, Ecol\lacZ Viability / fertility
Causes allele(s) Dhods3512, Ecol\lacZDhod-s3512 Stock availability 2 publicly available
LINE ID l(3)s3512
Genomic Location
Chromosomal location 3R ( 85A5 ) Sequence location 3R:4,478,441..4,478,441 [+]
Map ( GBrowse ) detailed view FBti0048644 FBti0037808 FBti0041504 FBti0126472 FBti0102682 FBti0014109 FBti0009967 FBti0068015 FBti0068017 FBti0125971_2 FBti0125971_1 FBti0106136 FBti0025189 FBti0103797 FBti0013445 FBti0028382 FBti0125972_2 FBti0125972_1 FBti0050344 FBti0125973_2 FBti0125973_1 FBti0043935 FBti0054527 FBti0009940 FBti0054560 FBti0112522 FBti0046299 FBti0143723 FBti0143860 FBti0065939 FBti0045453 FBti0143684 FBti0011774 FBti0111832 FBti0099881 FBti0109930 FBti0047607 FBti0106289 FBti0102220 FBti0109996 FBti0039957 FBti0108044 FBti0003112
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:4,478,441..4,478,441 [+]
(BDGP Project Members, 1994-1999)
Orientation
Cytological location
(computed by FlyBase)
85A5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
85A5-85A7 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ026394
(FlyBase, 1992-,  
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
(Bier et al., 1989)
Size 10.691Kb
Associated alleles
Ecol\lacZP\T.W
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Dhod
(BDGP Project Members, 1994-1999)
Ecol\lacZ
(BDGP Project Members, 1994-1999)
hide Alleles and Phenotypes
Causes alleles
Dhods3512
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Ecol\lacZDhod-s3512
(BDGP Project Members, 1994-1999)
Lethality
References
lethal | recessive
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
l(3)s3512
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
10223
w1118; P{lacW}Dhods3512/TM3, Sb1
Kyoto
111030
yd2 w1118 P{ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{neoFRT}82B P{lacW}Dhods3512/TM6B, P{Car20y}TPN1, Tb1
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hide Comments
Location 3R:4478441-4478442 confirmed by FlyBase alignment of dbGSS accession AQ026394 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}Dhods3512
(FlyBase, 2005, FlyBase, 1992-)
P{lacW}l(3)s3512s3512
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]