A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}HopEP418 Insertion

General Information
Symbol Dmel\P{EP}HopEP418 Species D. melanogaster
Name FlyBase ID FBti0010706
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) Hop Viability / fertility
Causes allele(s) HopEP418 Stock availability 1 publicly available
LINE ID EP(2)0418
Genomic Location
Chromosomal location 2L ( 21B8 ) Sequence location 2L:297,392..297,392 [+]
Map ( GBrowse ) detailed view FBti0039404 FBti0053045 FBti0034914 FBti0055237 FBti0057807 FBti0028662 FBti0100378 FBti0035463 FBti0072540 FBti0025868 FBti0109017 FBti0007108 FBti0108471 FBti0112995 FBti0005315 FBti0124479_2 FBti0124479_1 FBti0065042 FBti0043805 FBti0010706 FBti0100111 FBti0052028 FBti0046854 FBti0039328 FBti0067787 FBti0047990 FBti0108727 FBti0109980 FBti0024767 FBti0051094
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:297,392..297,392 [+]
(FlyBase, 2005)
Orientation
Cytological location
(computed by FlyBase)
21B8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
21B7-21B7 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
21C1-21C2 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ254793
(FlyBase, 1992-)
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Hop
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
HopEP418
(Gene Disruption Project members, 2001-, Pena-Rangel et al., 2002)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(2)0418
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17166
w1118; P{EP}HopEP418
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hide Comments
Location 2L:297391-297392 determined by FlyBase alignment of dbGSS accession AQ254793 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EP}EP0418
(FlyBase, 1992-)
P{EP}EP418
(FlyBase, 1992-)
P{EP}HopEP418
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050
A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]