A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}mmyEP2016 Insertion

General Information
Symbol Dmel\P{EP}mmyEP2016 Species D. melanogaster
Name FlyBase ID FBti0010773
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) mmy Viability / fertility
Causes allele(s) mmyEP2016 Stock availability none publicly available
LINE ID EP(2)2016
Genomic Location
Chromosomal location 2L ( 26D7 ) Sequence location 2L:6,473,851..6,473,851 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0106906 FBti0102162 FBti0102868 FBti0010748 FBti0070691 FBti0102170 FBti0055191 FBti0107451 FBti0110603 FBti0054369 FBti0034279 FBti0028083 FBti0028327 FBti0018616 FBti0028084 FBti0126672 FBti0024695 FBti0113402 FBti0027588 FBti0124605 FBti0044893 FBti0077964 FBti0055131 FBti0036396 FBti0026379 FBti0108698 FBti0021807 FBti0010773 FBti0107830 FBti0110733 FBti0025937 FBti0041579 FBti0116091 FBti0105684 FBti0048753 FBti0101740 FBti0011243 FBti0006867 FBti0004130 FBti0025662 FBti0099853 FBti0010915 FBti0026330 FBti0105686 FBti0026366 FBti0071167 FBti0102524 FBti0010855 FBti0056274 FBti0026371 FBti0099785 FBti0021678 FBti0039901 FBti0124606 FBti0036225 FBti0072832 FBti0010926 FBti0112947 FBti0112502 FBti0109131 FBti0021707 FBti0029225 FBti0103047 FBti0028936
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Rorth, 1996, Bellen et al., 2004)
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:6,473,851..6,473,851 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
26D7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
26D5-26D5 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ074028
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
mmy
(BDGP Project Members, 2000-, Schimmelpfeng et al., 2006)
hide Alleles and Phenotypes
Causes alleles
mmyEP2016
(Gene Disruption Project members, 2001-, Pena-Rangel et al., 2002, Schimmelpfeng et al., 2006)
Lethality
References
viable
(Schimmelpfeng et al., 2006)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(2)2016
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP2016
(Schimmelpfeng et al., 2006)
EP(2)2016
(Pena-Rangel et al., 2002, FlyBase, 1992-)
P{EP}BcDNA:LD24639EP2016
(FlyBase, 1992-)
P{EP}CG9535EP2016
(FlyBase, 1992-)
P{EP}EP2016
(FlyBase, 1992-)
P{EP}mmyEP2016
(FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Schimmelpfeng et al., 2006, Mech. Dev. 123(6): 487--499
Mummy encodes an UDP-N-acetylglucosamine-dipohosphorylase and is required during Drosophila dorsal closure and nervous system development. [FBrf0195253]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050
A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]