A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}wun2EP2217 Insertion

General Information
Symbol Dmel\P{EP}wun2EP2217 Species D. melanogaster
Name FlyBase ID FBti0010947
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) wun2 Viability / fertility
Causes allele(s) wun2EP2217 Stock availability none publicly available
LINE ID EP(2)2217
Genomic Location
Chromosomal location 2R ( 45D4 ) Sequence location 2R:5,301,691..5,301,691 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0061652 FBti0034307 FBti0043645 FBti0057959 FBti0102399 FBti0006269_1 FBti0006269_2 FBti0026320 FBti0033989 FBti0059202 FBti0103075 FBti0011275_2 FBti0108647 FBti0011275_1 FBti0059199 FBti0034633 FBti0104393 FBti0068492 FBti0029447 FBti0109389 FBti0105603 FBti0059369 FBti0011208 FBti0035293 FBti0103148 FBti0103149 FBti0005239 FBti0007659 FBti0109881 FBti0077080 FBti0113286 FBti0047530 FBti0149121 FBti0068937 FBti0036506 FBti0068972 FBti0029825 FBti0028954 FBti0023438 FBti0104750 FBti0068433 FBti0109654 FBti0059236 FBti0068506 FBti0028412 FBti0065313 FBti0048000 FBti0010947 FBti0034840 FBti0104032 FBti0108975 FBti0028949 FBti0006489 FBti0036881 FBti0100208 FBti0069348 FBti0071098 FBti0010940_1 FBti0113052 FBti0010940_2 FBti0110515 FBti0056246 FBti0113469 FBti0055873 FBti0029414 FBti0007639 FBti0036478 FBti0021122 FBti0025813 FBti0110878 FBti0024726 FBti0104730 FBti0021185 FBti0072078 FBti0035103 FBti0105770 FBti0011210 FBti0102897 FBti0125056_2 FBti0125056_1 FBti0100361 FBti0059574 FBti0033885 FBti0006461 FBti0108146 FBti0105522 FBti0112004
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:5,301,691..5,301,691 [+]
Orientation
Cytological location
(computed by FlyBase)
45D4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
45D4-45D4 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
Size 7.987Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
germline cell
hide Detailed Description
Statement
Reference
Expression of wun2EP2217 under the control of Scer\GAL4nos.UTR.T:Hsim\VP16 results in defects in germ cell migration in embryos. Expression of wun2EP2217 under the control of both Scer\GAL4twi.PG and Scer\GAL4how-24B results in a strong and completely penetrant germ cell migration phenotype; the germ cells are repelled from their normal target tissue (mesoderm) and instead remain on the midgut. The number of germ cells is reduced in these embryos. Gonadal mesoderm develops normally in these embryos. The embryos develop to adulthood, hatch and are often sterile. Expression of wun2EP2217 under the control of Scer\GAL4twi.PG, Scer\GAL4btl.PS or Scer\GAL448Y results in a decrease in germ cell number.
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Location 2R:4925999-4926000 confirmed by FlyBase alignment of dbGSS accession AQ073405 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
insertion of mobile activating element
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(2)2217
P{EP}EP2217
P{EP}wun2EP2217
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Starz-Gaiano et al., 2001, Development 128(6): 983--991
Spatially restricted activity of a Drosophila lipid phosphatase guides migrating germ cells. [FBrf0134584]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]