A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Dmel\P{EP}EP2423 Insertion

General Information
Symbol Dmel\P{EP}EP2423 Species D. melanogaster
Name FlyBase ID FBti0011118
Feature type transposable_element_insertion_site Created / Updated 1998-09-02/1998-09-02
Description
Inserted element P{EP} Localized function
Affected gene(s) CG6329 Expression data
Causes allele(s) Viability / fertility
LINE ID EP(2)2423 Stock availability
Genomic Location
Chromosomal location 2R ( 50C6 ) Sequence location 2R:9,713,866..9,713,866 [+]
Map ( GBrowse ) detailed view FBti0049604 FBti0067445 FBti0067876 FBti0065749 FBti0043564 FBti0046235 FBti0049841 FBti0054887 FBti0028709 FBti0025760 FBti0067436 FBti0051953 FBti0016273 FBti0025900 FBti0039680 FBti0006371 FBti0077922 FBti0011118 FBti0054813 FBti0026404 FBti0051607 FBti0076203
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:9,713,866..9,713,866 [+]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
50C6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
50C12-50C12 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Chromosome in situ
hide Sequence Data
Flanking sequence
AQ073573
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role 		 
Size 7.987Kb
Associated alleles
w+mC
TrlBRcRa
Scer\UAS14x.hs
Molecular map
Transposon class
Element type
hide Affected Gene(s)
Insertion within gene
Insertion may
affect gene
CG6329
(BDGP Project Members, 2000-)
Orientation
(relative to gene)
Gene
Orientation
References
 
 
 
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Stage
Tissue/Position
Reference
Additional Information
Statement
Reference
Assay mode
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(2)2423
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Szeged
-
P{EP}EP2423
Bloomington
17055
w1118; P{EP}EP2423
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hide Comments
Location 2R:9342268-9342269 confirmed by FlyBase alignment of dbGSS accession AQ073573 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(2)2423
(FlyBase, 1992-)
P{EP}EP2423
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
    hide References ( 8 )
    Research paper
    Jones, 2005, Genetics 169(4): 2075--2086
    RacGap50C negatively regulates wingless pathway activity during Drosophila embryonic development. [FBrf0188508]
    Bellen et al., 2004, Genetics 167(2): 761--781
    The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
    Spradling et al., 1999, Genetics 153(1): 135--177
    The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
    FlyBase analysis
    FlyBase, 2005, Assessment of transgenic construct insertion sites.
    Assessment of transgenic construct insertion sites. [FBrf0184339]
    FlyBase, 1992-, FlyBase curation
    FlyBase curation. [FBrf0105495]
    Computer file
    Gene Disruption Project members, 2001-, [title not yet available]
    [title not yet available] [FBrf0132177]
    BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
    Berkeley Drosophila Genome Project. [FBrf0125078]
    BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
    Berkeley Drosophila Genome Project. [FBrf0067338]