A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}nrv1EP2454 Insertion

General Information
Symbol Dmel\P{EP}nrv1EP2454 Species D. melanogaster
Name FlyBase ID FBti0011147
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) nrv1 Viability / fertility
Causes allele(s) nrv1EP2454 Stock availability 1 publicly available
LINE ID EP(2)2454
Genomic Location
Chromosomal location 2L ( 27B1 ) Sequence location 2L:6,787,431..6,787,431 [-]
Map ( GBrowse ) detailed view FBti0045204 FBti0143969 FBti0044769 FBti0047998 FBti0124615 FBti0107893 FBti0076025 FBti0057559 FBti0069645 FBti0018825 FBti0011147 FBti0069539 FBti0056639 FBti0054832 FBti0047494 FBti0055117 FBti0044699 FBti0065556 FBti0046452 FBti0055425 FBti0069742 FBti0006443 FBti0143851 FBti0039181 FBti0026297
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2L:6,787,431..6,787,431 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
27B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
27B1-27B1 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ073600
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
nrv1
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
nrv1EP2454
(Singh et al., 2005)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Expression of nrv1EP2454 under the control of Scer\GAL4ey.PH has no effect on eye size.
(Singh et al., 2005)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(2)2454
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17059
w1118; P{EP}nrv1EP2454
hide Linkouts
hide Comments
Location 2L:6787431-6787432 confirmed by FlyBase alignment of dbGSS accession AQ073600 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(2)2454
(FlyBase, 1992-)
P{EP}EP2454
(FlyBase, 1992-, FlyBase, 2005)
P{EP}nrv1EP2454
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Singh et al., 2005, Genetics 171(1): 169--183
Genetic interaction of Lobe with its modifiers in dorsoventral patterning and growth of the Drosophila eye. [FBrf0187660]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]