A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG1344EP2646 Insertion

General Information
Symbol Dmel\P{EP}CG1344EP2646 Species D. melanogaster
Name FlyBase ID FBti0011309
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG1344 Viability / fertility
Causes allele(s) CG1344EP2646 Stock availability 1 publicly available
LINE ID EP(2)2646
Genomic Location
Chromosomal location 2R ( 41F6 ) Sequence location 2R:1,541,600..1,541,600 [-]
Map ( GBrowse ) detailed view FBti0063120 FBti0063122 FBti0063742 FBti0063787 FBti0063123 FBti0063743 FBti0061463 FBti0061464 FBti0063751 FBti0063129 FBti0063133 FBti0063754 FBti0061489 FBti0063757 FBti0063137 FBti0063728 FBti0124961_1 FBti0124961_2 FBti0124962 FBti0011309 FBti0103024 FBti0025113
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:1,541,600..1,541,600 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
41F6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
41F9-41F9 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ073758
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG1344
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
CG1344EP2646
(Gene Disruption Project members, 2001-)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(2)2646
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17079
w1118; P{EP}CG1344EP2646/CyO
hide Linkouts
hide Comments
Location 2R:1161483-1161484 confirmed by FlyBase alignment of dbGSS accession AQ073758 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(2)2646
(FlyBase, 1992-)
P{EP}BcDNA:LD22679EP2646
(FlyBase, 1992-)
P{EP}BcDNAEP2646
(Horn et al., 2003)
P{EP}CG1344EP2646
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP2646
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Horn et al., 2003, Genetics 163(2): 647--661
piggyBac-based insertional mutagenesis and enhancer detection as a tool for functional insect genomics. [FBrf0158985]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]