A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}twfEP3701 Insertion

General Information
Symbol Dmel\P{EP}twfEP3701 Species D. melanogaster
Name FlyBase ID FBti0011782
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) twf Viability / fertility
Causes allele(s) twfEP3701 Stock availability 1 publicly available
LINE ID EP(3)3701
Genomic Location
Chromosomal location 3R ( 88A9 ) Sequence location 3R:9,948,482..9,948,482 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0148067 FBti0075450 FBti0011782 FBti0044920 FBti0101690 FBti0126081 FBti0042654
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:9,948,482..9,948,482 [-]
Orientation
Cytological location
(computed by FlyBase)
88A9 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
88A10-88A10 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
Size 7.987Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
adult mushroom body
border follicle cell | heat sensitive
interommatidial bristle
macrochaeta
microchaeta
mushroom body alpha-lobe
mushroom body beta-lobe
ommatidium
hide Detailed Description
Statement
Reference
Expression of twf[Scer\UAS.cWa] under the control of Scer\GAL4[ey-OK107] rescues the crossing over and, in severe cases, fusion of the β lobe of the adult mushroom body in twf[EP3701] mutant animals.
β lobes of the mushroom body cross the midline in approximately 50% of twf[EP3701] and 30% twf[EP3701]/Df(3R)su(Hw)7 mutant animal brains. In severe cases, the two β lobes are completely fused. β loves are bifurcated and thickened. 10% of twf[EP3701] mutants display unilateral or bilateral loss of the adult mushroom body α lobe. At 29[o]C, twf[EP3701] and twf[EP3701]/twf[110] mutant animals display a moderate but significant delay in border cell migration.
Nearly all twfEP3701 tsrk05633 double heterozygotes have at least one macrochaeta with defects at the bristle tip. The posterior scutellar and anterior dorsocentral bristles are the most frequently affected. 66% of bristles are split, branched or have a rough surface in these animals. tsrk05633/+ enhances the eye defects seen in twfEP3701 homozygotes.
Homozygous flies are slightly smaller and less active than wild-type flies. They show reduced or completely lost flight ability. Hatching frequency of twfEP3701 animals is slightly reduced, the larval period is significantly longer than normal, but the duration of the pupal period is wild type. No defects in border cell migration are seen in twfEP3701 egg chambers. twfEP3701 mutants have a rough eye phenotype. The interommatidial bristles are often tufted and the ommatidia are sometimes pitted and occasionally fused. All bristles show defects in morphology, with macrochaetae being more severely affected than microchaetae. The macrochaetae are shorter than normal and have a rough surface, with the ridges and grooves on the surface of the macrochaetae being highly irregular (in contrast to the completely straight ridges and grooves seen in wild-type bristles). The bristles often have a thicker portion somewhere along the shaft, and in this region the ridges are oriented perpendicular to the long axis. The tip of the bristle is not as thin as normal and has a smooth surface with only short, randomly oriented ridges. The macrochaetae, but not microchaetae, are often split, bent or branched. The hairs are also slightly shorter than normal. Mutant 48 hours old macrochaetae have a large number of small F-actin containing spots or tiny actin bundles. The spots are localised at the bristle surface between the main bundles and the tiny bundles appear to be oriented perpendicular to the long axis of the bristle.
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
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hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Comments
Location 3R:9948482-9948483 confirmed by FlyBase alignment of dbGSS accession AQ073130 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
insertion of mobile activating element
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EP}CG3172EP3701
P{EP}EP3701
P{EP}twfEP3701
Secondary FlyBase IDs
hide References ( 12 )
Research paper
Stephan et al., 2011, Mol. Biol. Cell 22(21): 4079--4092
Membrane-targeted WAVE mediates photoreceptor axon targeting in the absence of the WAVE complex in Drosophila. [FBrf0216499]
Wang et al., 2010, J. Cell Sci. 123(9): 1546--1556
Drosophila twinfilin is required for cell migration and synaptic endocytosis. [FBrf0210650]
Parrish et al., 2009, Neuron 63(6): 788--802
The microRNA bantam functions in epithelial cells to regulate scaling growth of dendrite arbors in drosophila sensory neurons. [FBrf0208858]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Wahlstrom et al., 2001, J. Cell Biol. 155(5): 787--795
Twinfilin is required for actin-dependent developmental processes in Drosophila. [FBrf0141598]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]