A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG11138EP1313 Insertion

General Information
Symbol Dmel\P{EP}CG11138EP1313 Species D. melanogaster
Name FlyBase ID FBti0011855
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG11138 Viability / fertility
Causes allele(s) CG11138EP1313 Stock availability 1 publicly available
LINE ID EP(X)1313
Genomic Location
Chromosomal location X ( 11B2 ) Sequence location X:12,477,198..12,477,198 [-]
Map ( GBrowse ) detailed view FBti0143211 FBti0104289 FBti0143873 FBti0099724 FBti0036791 FBti0033845 FBti0044652 FBti0037357 FBti0143799 FBti0102498 FBti0102445 FBti0071294 FBti0015658 FBti0011855 FBti0033476 FBti0024190 FBti0035178 FBti0108639 FBti0036359 FBti0056188 FBti0071484 FBti0109074 FBti0038852
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:12,477,198..12,477,198 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
11B2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
11B1-11B2 (in situ hybridization reported)
(BDGP Project Members, 1994-1999)
11B10-11B10 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ073182
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG11138
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
CG11138EP1313
(Pena-Rangel et al., 2002)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
pnrMD237/+ adults expressing CG11138EP1313 under the control of Scer\GAL4pnr-MD237 have extra scutellar macrochaetae and missing dorsocentral macrochaetae and microchaetae in the dorsal midline.
(Pena-Rangel et al., 2002)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(X)1313
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
11355
w1118 P{EP}CG11138EP1313
hide Linkouts
hide Comments
Location X:12417102-12417103 confirmed by FlyBase alignment of dbGSS accession AQ073182 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EP}BEST:RE18684EP1313
(FlyBase, 1992-)
P{EP}CG11138EP1313
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP1313
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Ang et al., 2006, Dev. Biol. 293(1): 178--190
Lim kinase regulates the development of olfactory and neuromuscular synapses. [FBrf0190083]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050
A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]