A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG2982EP1316 Insertion

General Information
Symbol Dmel\P{EP}CG2982EP1316 Species D. melanogaster
Name FlyBase ID FBti0011858
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG2982 Viability / fertility
Causes allele(s) CG2982EP1316 Stock availability 1 publicly available
LINE ID EP(X)1316
Genomic Location
Chromosomal location X ( 4B6 ) Sequence location X:4,213,537..4,213,537 [+]
Map ( GBrowse ) detailed view FBti0052752 FBti0049777 FBti0014917 FBti0041996 FBti0070785 FBti0059138 FBti0059401 FBti0110215 FBti0108745 FBti0011858 FBti0047215 FBti0066925 FBti0018534 FBti0048193 FBti0068959 FBti0017142 FBti0055855 FBti0070088 FBti0069416 FBti0069738 FBti0028001 FBti0028003 FBti0028451 FBti0028002 FBti0058827 FBti0108635 FBti0054697 FBti0038674
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:4,213,537..4,213,537 [+]
Orientation
Cytological location
(computed by FlyBase)
4B6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
4B4-4B6 (in situ hybridization reported)
4B5-4B5 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
Size 7.987Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Young mutant adults exposed to 16 hours of heat shock at 38[o]C show dramatically reduced survival compared to control flies.
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Comments
Location X:4164740-4164741 determined by FlyBase alignment of dbGSS accession AQ073184 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
insertion of mobile activating element
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(X)1316
P(EP)CG2982EP1316
P{EP}CG2982EP1316
P{EP}EP1316
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Kirienko and Fay, 2010, EMBO J. 29(4): 727--739
SLR-2 and JMJC-1 regulate an evolutionarily conserved stress-response network. [FBrf0210031]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Marcus, 2003, Genetics 163(2): 591--597
Female site-specific transposase-induced recombination: a high-efficiency method for fine mapping mutations on the X chromosome in Drosophila. [FBrf0157240]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]