A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{GT1}skyBG00162 Insertion

General Information
Symbol Dmel\P{GT1}skyBG00162 Species D. melanogaster
Name FlyBase ID FBti0017147
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) Mtp, sky Viability / fertility viable, fertile
Causes allele(s) skyBG00162 Stock availability 1 publicly available
LINE ID BG00162
Genomic Location
Chromosomal location 2L ( 38F5 ) Sequence location 2L:20,917,877..20,917,877 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0063390 FBti0063391 FBti0147182 FBti0038082 FBti0071126 FBti0043459 FBti0050423 FBti0008832 FBti0033717 FBti0035901 FBti0106862 FBti0037441 FBti0110996 FBti0124890_2 FBti0049981 FBti0043239 FBti0047963 FBti0124890_1 FBti0103085 FBti0072424 FBti0054997 FBti0112642 FBti0112653 FBti0114994 FBti0065031 FBti0028383 FBti0034226 FBti0113233 FBti0069584 FBti0029080 FBti0017147 FBti0035796 FBti0069767 FBti0064868 FBti0111377 FBti0025996 FBti0107510 FBti0106260 FBti0108387 FBti0104018 FBti0069766 FBti0028862 FBti0005273 FBti0071080 FBti0111993 FBti0034060 FBti0066243 FBti0045218 FBti0124891 FBti0051127 FBti0124892 FBti0018618 FBti0018614
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{GT1}; created and vetted by the Gene Disruption Project (GDP). The P{GT1} construct is described as a dual-tagged gene trap (FBrf0132344):it carries (1) w[+mGT1] mini-white marker, designed to confer a pigmented eye phenotype only if the construct is inserted within a host gene, and (2) a promoter-less Ser\GAL4 gene which is expressed if it is produced as a fusion with the mRNA produced by the host gene. The construct also carries a Tn\neoR selectable marker (FBrf0132344).
(Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:20,917,877..20,917,877 [-]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
38F5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
38F3 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AZ877624
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Mtp
(Gene Disruption Project members, 2001-)
sky
(Gene Disruption Project members, 2001-, FlyBase Genome Annotators, 2002-2003)
hide Alleles and Phenotypes
Causes alleles
skyBG00162
(Gene Disruption Project members, 2001-, FlyBase Genome Annotators, 2002-2003)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG00162
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12406
w1118; P{GT1}skyBG00162/CyO, P{sevRas1.V12}FK1
hide Linkouts
hide Comments
Location 2L:20905470-20905471 confirmed by FlyBase alignment of dbGSS accession AZ877624 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG00162
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{GT1}CG9339BG00162
(FlyBase, 1992-, FlyBase, 2005)
P{GT1}CG9342BG00162
(FlyBase, 1992-)
P{GT1}skyBG00162
 
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]