A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{GT1}Dp1BG01405b Insertion

General Information
Symbol Dmel\P{GT1}Dp1BG01405b Species D. melanogaster
Name FlyBase ID FBti0017614
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) Dp1, imd Viability / fertility fertile, viable
Causes allele(s) Dp1BG01405b, imdBG01405b Stock availability none publicly available
LINE ID BG01405
Genomic Location
Chromosomal location 2R ( 55C8 ) Sequence location 2R:14,299,531..14,299,531 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0050368 FBti0024068 FBti0106600 FBti0025725 FBti0125274_1 FBti0125274_2 FBti0018144 FBti0106905 FBti0024886 FBti0023242 FBti0038892 FBti0041471 FBti0075884 FBti0075121 FBti0042157 FBti0145373 FBti0034253 FBti0038837 FBti0035017 FBti0100077 FBti0017614 FBti0036894 FBti0103856 FBti0028874 FBti0018553 FBti0109560 FBti0077004 FBti0026376 FBti0010973 FBti0102218 FBti0106540 FBti0053833 FBti0053879 FBti0026021 FBti0070528 FBti0011117 FBti0047476 FBti0067858 FBti0125275_2 FBti0125275_1 FBti0041851 FBti0099757
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{GT1}; created and vetted by the Gene Disruption Project (GDP). The P{GT1} construct is described as a dual-tagged gene trap (FBrf0132344):it carries (1) w[+mGT1] mini-white marker, designed to confer a pigmented eye phenotype only if the construct is inserted within a host gene, and (2) a promoter-less Ser\GAL4 gene which is expressed if it is produced as a fusion with the mRNA produced by the host gene. The construct also carries a Tn\neoR selectable marker (FBrf0132344).
(Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:14,299,531..14,299,531 [+]
(FlyBase, 2005)
Orientation
Cytological location
(computed by FlyBase)
55C8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
55C10 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH011393
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Dp1
(Gene Disruption Project members, 2001-)
imd
(FlyBase, 1996-)
hide Alleles and Phenotypes
Causes alleles
Dp1BG01405b
(Gene Disruption Project members, 2001-, FlyBase, 1996-)
imdBG01405b
(FlyBase, 1996-)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG01405
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
t
(Gene Disruption Project members, 2001-)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Location 2R:13926888-13926889 determined by FlyBase alignment of dbGSS accession BH011393 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
Originally isolated in multiple-insertion line.
(Gene Disruption Project members, 2001-)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG01405
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{GT1}Dp1BG01405b
(FlyBase, 2005, FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]