A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{GT1}wawBG02635 Insertion

General Information
Symbol Dmel\P{GT1}wawBG02635 Species D. melanogaster
Name FlyBase ID FBti0017759
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) bbx, waw Viability / fertility viable, fertile
Causes allele(s) bbxBG02635, wawBG02635 Stock availability 1 publicly available
LINE ID BG02635
Genomic Location
Chromosomal location X ( 19F5 ) Sequence location X:21,234,139..21,234,139 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0064209 FBti0042519 FBti0131886 FBti0143629 FBti0043120 FBti0071434 FBti0011896 FBti0017759 FBti0052745 FBti0048237 FBti0070871 FBti0071918 FBti0046155 FBti0039600 FBti0053700
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{GT1}; created and vetted by the Gene Disruption Project (GDP). The P{GT1} construct is described as a dual-tagged gene trap (FBrf0132344):it carries (1) w[+mGT1] mini-white marker, designed to confer a pigmented eye phenotype only if the construct is inserted within a host gene, and (2) a promoter-less Ser\GAL4 gene which is expressed if it is produced as a fusion with the mRNA produced by the host gene. The construct also carries a Tn\neoR selectable marker (FBrf0132344).
(Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
X:21,234,139..21,234,139 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
19F5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
19F2 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH011546
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
bbx
(Gene Disruption Project members, 2001-, FlyBase Genome Annotators, 2002-2003)
waw
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
bbxBG02635
(Gene Disruption Project members, 2001-, FlyBase Genome Annotators, 2002-2003)
wawBG02635
(Gene Disruption Project members, 2001-, FlyBase Genome Annotators, 2002-2003)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG02635
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12722
w1118 P{GT1}wawBG02635 bbxBG02635
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hide Comments
Location X:21173788-21173789 confirmed by FlyBase alignment of dbGSS accession BH011546 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG02635
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{GT1}wawBG02635
(FlyBase, 2005, FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]