A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{GT1}PGRP-LCBG00650 Insertion

General Information
Symbol Dmel\P{GT1}PGRP-LCBG00650 Species D. melanogaster
Name FlyBase ID FBti0018375
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) PGRP-LA, PGRP-LC Viability / fertility viable, fertile
Causes allele(s) PGRP-LCBG00650 Stock availability 1 publicly available
LINE ID BG00650
Genomic Location
Chromosomal location 3L ( 67B1 ) Sequence location 3L:9,333,505..9,333,505 [+]
Map ( GBrowse ) detailed view FBti0041551 FBti0070313 FBti0047270 FBti0125586_2 FBti0125586_1 FBti0055056 FBti0069219 FBti0018375 FBti0070496 FBti0070504 FBti0023704 FBti0046418 FBti0050887 FBti0050227 FBti0103450 FBti0069817 FBti0007971 FBti0072847 FBti0111012 FBti0059316 FBti0112501 FBti0055516 FBti0038897 FBti0021632 FBti0030107
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:9,333,505..9,333,505 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
67B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
67A8 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AZ933363
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
PGRP-LA
(Gene Disruption Project members, 2001-)
PGRP-LC
(Ramet et al., 2002)
hide Alleles and Phenotypes
Causes alleles
PGRP-LCBG00650
(Ramet et al., 2002)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG00650
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12500
w1118; P{GT1}PGRP-LCBG00650
hide Linkouts
hide Comments
Location 3L:9314352-9314353 confirmed by FlyBase alignment of dbGSS accession AZ933363 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG00650
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{GT1}BG00650
(FlyBase, 1992-)
P{GT1}PGRP-LCBG00650
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Ramet et al., 2002, Nature 416(6881): 644--648
Functional genomic analysis of phagocytosis and identification of a Drosophila receptor for E. coli. [FBrf0147168]
Personal communication to FlyBase
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]